Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31399
(581 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 44 2e-05
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 40 4e-04
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 38 0.001
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 38 0.001
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 37 0.002
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 36 0.003
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 35 0.008
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 35 0.008
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 35 0.010
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 33 0.023
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 33 0.040
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 32 0.053
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 31 0.093
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 31 0.12
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 31 0.12
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 31 0.16
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 31 0.16
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 31 0.16
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.16
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 30 0.21
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 30 0.28
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 0.37
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 29 0.37
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.50
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 29 0.50
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 29 0.65
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 29 0.65
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 28 0.87
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 28 0.87
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 28 0.87
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 28 1.1
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 28 1.1
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 1.5
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 2.0
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 27 2.0
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 26 3.5
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 26 3.5
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 26 4.6
SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit... 26 4.6
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 25 6.1
SPAC12G12.10 |||WD repeat protein, human WDR21 family|Schizosacc... 25 8.1
SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual 25 8.1
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 25 8.1
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac... 25 8.1
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSAR 133
++TG DG I+ ++ SG V T H S + LC++ + N++ S+S DGS R
Sbjct: 354 IITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVR 406
Score = 29.9 bits (64), Expect = 0.28
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 219 TGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSSG 106
TGH +I+ + ++A +STS D +AR+ D G
Sbjct: 143 TGHFDDIVSISWSADSRFFISTSKDLTARLHSVDPIEG 180
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 222 LTGHRSEILDLCYNAKENLILSTSDDGSARIFKY 121
LTGH++ ++ ++ + I + S DG+ ++KY
Sbjct: 186 LTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKY 219
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 39.5 bits (88), Expect = 4e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVS 112
L++G D SIR + +GE L GH I + Y + N+ +S S D S R+ +D+S
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRV--WDLS 577
Query: 111 SG 106
+G
Sbjct: 578 TG 579
Score = 31.9 bits (69), Expect = 0.070
Identities = 20/65 (30%), Positives = 38/65 (58%)
Frame = -3
Query: 300 KNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKY 121
+N ++G +D SIR ++ +G +L GH + + L N +N ++S S D + RI +
Sbjct: 559 RNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLL--NVFQNRLISGSADSTIRI--W 614
Query: 120 DVSSG 106
D+++G
Sbjct: 615 DLNTG 619
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 37.5 bits (83), Expect = 0.001
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -3
Query: 396 SVTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCV-IL 220
SV IWD A + V ++ W + L +G D I + R+ E +L
Sbjct: 314 SVEIWDAATCKKTRTMSGHTERVGALS---WNDHVLSSGGRDNHILHRDVRAPEHYFRVL 370
Query: 219 TGHRSEILDLCYNAKENLILSTSDDGSARIF 127
T HR E+ L +N+ ENL+ S +D + ++
Sbjct: 371 TAHRQEVCGLEWNSNENLLASGGNDNALMVW 401
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 321 VTKMFWVKN--NLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYN 181
VT + WV+ +L G +GS+ ++ + ++ ++GH + L +N
Sbjct: 294 VTSLRWVQRGTHLAVGTHNGSVEIWDAATCKKTRTMSGHTERVGALSWN 342
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 37.5 bits (83), Expect = 0.001
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = -3
Query: 396 SVTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVILT 217
++ +W++A Q E +GVT + + + L++G +D +IR + R+ E IL
Sbjct: 294 TIRLWNLATF---QQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECISILH 350
Query: 216 GHRSEILDLCYNAKENLILSTSDDGSARIFKY 121
GH + LC L++S S D + +++ +
Sbjct: 351 GHTDSV--LCLTFDSTLLVSGSADCTVKLWHF 380
Score = 35.5 bits (78), Expect = 0.006
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = -3
Query: 327 NGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSD 148
+GV + V+N L +G D +IR + + +Q +L GH S + C + ++S S
Sbjct: 274 DGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGV--TCLQFDQCKLISGSM 331
Query: 147 DGSARIFKYDVS 112
D + RI+ Y S
Sbjct: 332 DKTIRIWNYRTS 343
Score = 28.7 bits (61), Expect = 0.65
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVS 112
L++G D +++ + G++ + L GH + + L+LS SDD + +I+ + +
Sbjct: 366 LVSGSADCTVKLWHFSGGKR-ITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETN 424
Query: 111 S 109
+
Sbjct: 425 T 425
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 36.7 bits (81), Expect = 0.002
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVS 112
+ T D S+R ++G++G+ L GH + + ++ L++S+S D + ++ +DV
Sbjct: 404 IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKV--WDVR 461
Query: 111 S 109
S
Sbjct: 462 S 462
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 36.3 bits (80), Expect = 0.003
Identities = 33/151 (21%), Positives = 62/151 (41%)
Frame = -3
Query: 579 AIDIHPDNSLXASISTDAKVILTTTNNGKIVGELQTENDLETVAFAQDQXXXXXXXXXXX 400
+ D + + ++ + KV + N+ I+ L+ + + A A
Sbjct: 248 SFDCNAEGNVLFLGGSSGKVKVVNINSSHILASLEAQTE-SVEAIALCTALPICACASVD 306
Query: 399 GSVTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVIL 220
G+V ++D A L+ + + P + K L+T C D IR ++ RSG+
Sbjct: 307 GTVALYDSAS--LKFRKSLPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLLGEY 364
Query: 219 TGHRSEILDLCYNAKENLILSTSDDGSARIF 127
TGH+ IL + +++ SDD +F
Sbjct: 365 TGHQEPILCMAITPDGKRVVTGSDDTELLVF 395
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 243 SGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFK 124
+GEQ LTGH+ I+ + ++ I + D R++K
Sbjct: 93 TGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWK 132
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEI 199
L GC DGSI + SG+ ++ GH + +
Sbjct: 161 LAAGCNDGSIWMWSLPSGKVVQVMYGHTAPV 191
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 35.1 bits (77), Expect = 0.008
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -3
Query: 300 KNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKY 121
KN + G D +R Y +GE+ H I L + + +L++SDD + + F +
Sbjct: 68 KNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNW 127
Query: 120 DVS 112
D+S
Sbjct: 128 DMS 130
Score = 30.3 bits (65), Expect = 0.21
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -3
Query: 300 KNNLMTGCLDGSIRAYEGRSGEQCV-ILTGHRSEILDLCYNAKENLILSTSDDGSARIF 127
K L+T D I+ ++ ++ + CV IL GH + + +++K +I+S S+DG+ +I+
Sbjct: 198 KPYLITAGDDNLIKVWDYQT-KACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 35.1 bits (77), Expect = 0.008
Identities = 15/60 (25%), Positives = 34/60 (56%)
Frame = -3
Query: 288 MTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSS 109
++G D S++ ++ ++G+ + GH++ ++ +C++ S S D ARI+ D +S
Sbjct: 554 LSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 32.3 bits (70), Expect = 0.053
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVS 112
L+TG D I+ ++ + + + +GH +I L ++ I+S S D +AR+ +DV
Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARL--WDVE 432
Query: 111 SG 106
+G
Sbjct: 433 TG 434
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 34.7 bits (76), Expect = 0.010
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -3
Query: 282 GCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIF 127
G +DG+I+ ++ R+ +L GH+ I L + + +LS S D + RIF
Sbjct: 195 GGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIF 246
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 306 WVKNNLMTGCLDGSIRAYE-GRSGEQCVILTGHRSEILDLCYNAKENLILSTSDD 145
W +N+ G Y +G+ +L GH + + ++ +++ILS S D
Sbjct: 277 WSRNSRFVGAGSSDKNVYVWSATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSD 331
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 33.5 bits (73), Expect = 0.023
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = -3
Query: 273 DGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVS 112
D +IR + +S ILTGH ++ ++ E+LI+S S D + R+ +D+S
Sbjct: 116 DQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRV--WDIS 167
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKY 121
++T +G I+ ++ R G GH + + ++ + L +S DD ++ Y
Sbjct: 26 ILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNY 82
Score = 25.4 bits (53), Expect = 6.1
Identities = 19/91 (20%), Positives = 38/91 (41%)
Frame = -3
Query: 393 VTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVILTG 214
+ +WD L + + V G+ + ++G D + + +S + L G
Sbjct: 35 IQLWDYRMGTLLDRFDGHDGPVRGIA-FHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCG 93
Query: 213 HRSEILDLCYNAKENLILSTSDDGSARIFKY 121
H + ++ + ILS SDD + RI+ +
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNW 124
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 32.7 bits (71), Expect = 0.040
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -3
Query: 294 NLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDV 115
++ TG D +I+ + +GE L GH + L +E L+LS S D S + +DV
Sbjct: 104 HIYTGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDAS--LIVWDV 161
Query: 114 SS 109
SS
Sbjct: 162 SS 163
Score = 30.7 bits (66), Expect = 0.16
Identities = 19/85 (22%), Positives = 40/85 (47%)
Frame = -3
Query: 357 HQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNA 178
H+ T+ E+ + N+ T C D IR ++ +G I +GH + +
Sbjct: 257 HEETRMEHPDVCTDVLTLADGNIATACRDEEIRVWDTTTGNVKDIYSGHYESVTKIL--Q 314
Query: 177 KENLILSTSDDGSARIFKYDVSSGN 103
++ ++S+S D + R++ + S+ N
Sbjct: 315 WKSYLISSSLDQTIRVWDLEYSADN 339
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 32.3 bits (70), Expect = 0.053
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVS 112
L TG D + R ++ R+G + H S + LC +A + L L+++D+ S I +D+
Sbjct: 502 LATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSA-DGLSLASADE-SGIIKVWDLR 559
Query: 111 SGN 103
S N
Sbjct: 560 SSN 562
Score = 29.9 bits (64), Expect = 0.28
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Frame = -3
Query: 282 GCLDGSIRAYEG-RSGEQCVI-----------LTGHRSEILDLCYNAKENLILSTSDDGS 139
GC D SI Y +G Q ++ L GH + + + ++ ILS S+DG
Sbjct: 367 GCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSISPQKEFILSCSEDGF 426
Query: 138 ARIFKYDVSS 109
R++ D S
Sbjct: 427 TRLWSKDTKS 436
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 31.5 bits (68), Expect = 0.093
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 300 KNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCY--NAKENLILSTSDDGSARIF 127
K L +G D ++ ++ R+G L GH++ I+ + N N + + S D + R+F
Sbjct: 218 KGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVF 277
Score = 29.1 bits (62), Expect = 0.50
Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
Frame = -3
Query: 576 IDIHPDNSLXASISTDAKVILTTTNNGKIVGELQT-ENDLETVAFAQDQXXXXXXXXXXX 400
+D HP L AS S D V G + L +N + +F ++
Sbjct: 212 VDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRD 271
Query: 399 GSVTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAY 253
+ ++D+ E +VN VT N L TG DGS+ Y
Sbjct: 272 STCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHY 320
Score = 25.4 bits (53), Expect = 6.1
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = -3
Query: 297 NNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIF 127
+ +T DGS++ + + + LTGH ++ + ++ + L+ S S D + +
Sbjct: 177 SKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFW 233
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 31.1 bits (67), Expect = 0.12
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 264 IRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYD 118
I Y+ SG+Q L GH + I + +N +L+LS +G +I+ D
Sbjct: 211 ITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIKIWDID 259
Score = 29.5 bits (63), Expect = 0.37
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Frame = -3
Query: 579 AIDIHPDNSLXASISTDAKVILTTTNNGKIVGELQTENDLETVAFAQDQXXXXXXXXXXX 400
++ P ++L A+ + + +G VG+L+ + A A +
Sbjct: 192 SVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRG-HAAWIFAVAFNPVGDLLLSADVE 250
Query: 399 GSVTIWDVARQLLRHQCTKPENEVNG-VTKMFWVKNNLMTGCLDGSIRAYEGRSGE 235
G + IWD+ +C ++E +G + + W KN + D SIR Y + E
Sbjct: 251 GKIKIWDIDTM----ECISTQSETDGAIWAVAWYKNGFIVAGADKSIRWYRAAATE 302
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 31.1 bits (67), Expect = 0.12
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -3
Query: 318 TKMFWVKNN--LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDD 145
T M WV N + T D A + ++ SEI DLC++ N +++ + D
Sbjct: 90 TIMLWVPTNTPITTLADDAEELALAKEYWKVKIVCRSMGSEIYDLCWSVDSNFLIAGAMD 149
Query: 144 GSARIFKYDVSSG 106
S R+ YD +G
Sbjct: 150 NSLRL--YDAHTG 160
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 30.7 bits (66), Expect = 0.16
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = -3
Query: 339 ENEVNGVTKMFW---VKNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKEN 169
+N +G++ + + VKN L+ GC DGS+ Y+ + + S IL L Y ++
Sbjct: 9 KNSKDGISSVIFSPSVKNELIAGCWDGSLLHYQISENPELLGKYDLSSPILSLEYTDEKT 68
Query: 168 LILSTSD 148
++ D
Sbjct: 69 ALVGNLD 75
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 30.7 bits (66), Expect = 0.16
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 273 DGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYD 118
D +I+ ++ +GE +L GHR + +N + S S D + RI+ D
Sbjct: 486 DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537
Score = 26.2 bits (55), Expect = 3.5
Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 1/140 (0%)
Frame = -3
Query: 525 KVILTTTNNGKIVGELQTENDLETVAFAQDQXXXXXXXXXXXGSVTIWDVARQLLRHQCT 346
++I T + G+ + ++ + D A A +TI+++ R +
Sbjct: 41 RIIGTRSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSG--RRIKS 98
Query: 345 KPENEVNGVTKMFWVKNNLM-TGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKEN 169
+E +T N L+ TG +G ++ ++ GH I LC+ +N
Sbjct: 99 MKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQN 158
Query: 168 LILSTSDDGSARIFKYDVSS 109
+ S +R+ +D++S
Sbjct: 159 TWVLASGADDSRVRLWDLNS 178
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 30.7 bits (66), Expect = 0.16
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLIL 160
++TG DGS+ ++ ++G S+IL LC+ K ++L
Sbjct: 238 MVTGSDDGSVHCWDVKTGVSLQSFQFRSSQILSLCFRPKYKMLL 281
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 30.7 bits (66), Expect = 0.16
Identities = 12/57 (21%), Positives = 32/57 (56%)
Frame = -3
Query: 273 DGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSSGN 103
DG + ++G++G+Q + H+ I + ++ + +++S S +I +D ++G+
Sbjct: 210 DGKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKI--WDANTGS 264
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = -3
Query: 294 NLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDD 145
+L +G ++GS+ ++ + +LTGH I +C+++ + +L+ S D
Sbjct: 38 HLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASRD 87
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.9 bits (64), Expect = 0.28
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -3
Query: 294 NLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFK 124
N T D +R ++G+S + + L GH SE+ L ++S S D S R+++
Sbjct: 632 NFFTCSKDREVRYWDGKSFDLILKLRGHHSEVWALAVG--PTFVVSGSHDHSIRLWE 686
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 29.5 bits (63), Expect = 0.37
Identities = 12/58 (20%), Positives = 26/58 (44%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYD 118
+++ DG++R ++ +G +L GH + + N +S D RI+ +
Sbjct: 590 IVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLE 647
Score = 29.1 bits (62), Expect = 0.50
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 306 WVKNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEI 199
+V + L+TG D ++R ++ R+GE + GH S I
Sbjct: 454 YVGDTLVTGSTDRTVRVWDLRTGECKQVFYGHTSTI 489
Score = 28.7 bits (61), Expect = 0.65
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -3
Query: 273 DGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSSGN 103
D IR + SGE L GH + + + +N +N+++S S + +D+++G+
Sbjct: 638 DAKIRIWNLESGELLQTLHGHSNLVSQVTFN--QNILVSASAPPDTSLRVWDLNTGS 692
Score = 25.4 bits (53), Expect = 6.1
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 579 AIDIHPDNSLXASISTDAKVILTTTNNGKIVGELQTENDL-ETVAFAQDQXXXXXXXXXX 403
++ I+P S TDAK+ + +G+++ L ++L V F +Q
Sbjct: 622 SVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTF--NQNILVSASAPP 679
Query: 402 XGSVTIWDV 376
S+ +WD+
Sbjct: 680 DTSLRVWDL 688
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 29.5 bits (63), Expect = 0.37
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = -3
Query: 285 TGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSSG 106
+G +DG IR ++ R G GH + I L +++ N + S S D S RI +D+ SG
Sbjct: 511 SGTVDGLIRIWDLRIGLPVRSFIGHTAPISSLQFDS--NHLYSGSYDNSVRI--WDLRSG 566
Query: 105 N 103
+
Sbjct: 567 S 567
Score = 25.0 bits (52), Expect = 8.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -3
Query: 321 VTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDG 142
++ + + N+L +G D S+R ++ RSG I+ + Y + + SD+
Sbjct: 539 ISSLQFDSNHLYSGSYDNSVRIWDLRSGSPINIIPMEKKVNSLRLYQGR---LAVASDEP 595
Query: 141 SARIF 127
+ RIF
Sbjct: 596 NVRIF 600
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.1 bits (62), Expect = 0.50
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = -3
Query: 216 GHRSEILDLCYNAKENLILSTSDDGSARIF 127
GH ++ILDL + ++ N +LS+S D +AR++
Sbjct: 307 GHTADILDLSW-SRNNFLLSSSMDKTARLW 335
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 29.1 bits (62), Expect = 0.50
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -3
Query: 225 ILTGHRSEILDL-CYNAKEN--LILSTSDDGSARIFKY 121
I GH + +L C+ K+N ++LS S DG+ R +KY
Sbjct: 386 IFQGHEDCVWELFCHEVKDNNPILLSLSSDGTVRGWKY 423
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 28.7 bits (61), Expect = 0.65
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -3
Query: 393 VTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNN----LMTGCLDGSIRAYEGRSGEQCV 226
+ +WD R + + VT M + + LMTG DG+I+ Y E+
Sbjct: 1014 IQVWDWRRNRCLNSFKTSASATTNVTDMQLLNEDDVALLMTGSSDGTIKLYRDYENEKVE 1073
Query: 225 ILTGHRSEILDLCYNAKENLIL 160
++T S + DL + + +L
Sbjct: 1074 LVTSWNS-LSDLVFGDRNASLL 1094
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 28.7 bits (61), Expect = 0.65
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 390 TIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVIL 220
T+WD+ Q + Q + EV V + N ++ DGS+R ++ RS + I+
Sbjct: 192 TVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHSTII 248
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 28.3 bits (60), Expect = 0.87
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLIL-STSDDGSARIF 127
+ T SIR + +SG L+GH +L + + K +L S S DG+ R++
Sbjct: 162 IATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLW 217
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 28.3 bits (60), Expect = 0.87
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENL-ILSTSDDGSARIF 127
+++G D IR + SG+ L+GH + + YN + S DD + RI+
Sbjct: 443 VLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIW 498
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 28.3 bits (60), Expect = 0.87
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = -3
Query: 225 ILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSSG 106
+L GH ++ + ++ + +ILS+S D S +++ D ++G
Sbjct: 263 LLMGHEDWVMSVDWHPTKEMILSSSADSSMIVWEPDTNTG 302
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 264 IRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDD 145
IR YE +S Q +L GH + + ++ + ILS D
Sbjct: 560 IRLYETQSWNQQQVLKGHSLTVTTIKFSPDDRYILSAGRD 599
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 27.9 bits (59), Expect = 1.1
Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Frame = -3
Query: 564 PDNSLXASISTDAKVILTTTNNGKIVGELQT-ENDLETVAFAQDQXXXXXXXXXXXGSVT 388
PD A+ S D KVI T++G +V +L E + +VAF+ D ++
Sbjct: 427 PDGQFIAAGSLD-KVIRIWTSSGTLVEQLHGHEESVYSVAFSPD--GKYLVSGSLDNTIK 483
Query: 387 IWDVARQLLRHQCTKPENEVNGVTKMFWVKNN--------------LMTGCLDGSIRAYE 250
+W++ Q + + E G+ K + + +++G D +I+ +
Sbjct: 484 LWEL--QCVSNVAPSMYKE-GGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS 540
Query: 249 GRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYD 118
S + L GH + ++ + + + + S D ARI+ Y+
Sbjct: 541 PDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 584
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 264 IRAYEGRSG--EQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIF 127
IR YE SG E C + GH + + + + I ++S DG+ +I+
Sbjct: 35 IRNYESHSGFSEYCTLF-GHEKSVTCVSVSPNKRWIATSSSDGTIKIW 81
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = -3
Query: 300 KNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKY 121
K + T DG+I+ + + L GH I + + + S SDD + RI+ +
Sbjct: 66 KRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDF 125
Query: 120 D 118
+
Sbjct: 126 E 126
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 27.5 bits (58), Expect = 1.5
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQ-CVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDV 115
+++G DG++R + +GEQ CV+ S + L ++ + +I T S+ I ++
Sbjct: 442 IVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFDHR-RIIACTH---SSEILVWNF 497
Query: 114 SSGN*CT 94
G CT
Sbjct: 498 DDGLDCT 504
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKY 121
+++G D ++ ++ S L GH +L L + + NL++S S D + I+ +
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDW 290
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.1 bits (57), Expect = 2.0
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = -3
Query: 471 ENDLETVAFAQDQXXXXXXXXXXXGSVTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNN 292
E+D +A +++ ++ D A + + T E++ V ++
Sbjct: 103 EDDTRILAVTEERMGYAGTVTVFRVPISESDAAAETPLYVITTRESKAT-VAGWSYLSKF 161
Query: 291 LMTGCLDGSIRAYEGRSGEQCVILTGHR--SEILDLCYNAKENLILSTSDDGSARIFKYD 118
L TG DGS+ Y+ +GE H S I DL + +++ D +A+ D
Sbjct: 162 LFTGHEDGSVSRYDAITGEFVESKQVHNSGSTITDLQFYPDRTYFITSCKDTTAKAIDVD 221
Score = 25.0 bits (52), Expect = 8.1
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 294 NLMTGCL-DGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYD 118
+L+ C D I + +GE+ GH I N L++S + D + R+ +D
Sbjct: 23 DLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRL--WD 80
Query: 117 VSSG 106
V +G
Sbjct: 81 VKTG 84
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 222 LTGHRSEILDLCYNAKENLILSTSDDGS 139
L GH ++I DLC++ L++S D S
Sbjct: 130 LLGHDNDIQDLCWSYDSQLVVSVGLDSS 157
Score = 26.6 bits (56), Expect = 2.6
Identities = 18/87 (20%), Positives = 41/87 (47%)
Frame = -3
Query: 384 WDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVILTGHRS 205
W R+LL H +N++ + + + + G LD SI + G + E+ + H+S
Sbjct: 124 WRSYRRLLGH-----DNDIQDLCWSYDSQLVVSVG-LDSSIIVWNGTTFERLKRIEAHQS 177
Query: 204 EILDLCYNAKENLILSTSDDGSARIFK 124
+ + ++ + SDD + ++++
Sbjct: 178 HVKGITFDPAGKYFATESDDRTIKVWR 204
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 3.5
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Frame = -3
Query: 576 IDIHPDNSLXASISTDAKVILTTTNNGKIVGELQTE-NDLETVAFAQDQXXXXXXXXXXX 400
+D+ D++ AS D + + N GK+ L + T+ + +D
Sbjct: 62 LDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDS- 120
Query: 399 GSVTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSG 238
V +WD R + + V+ + ++ ++TG DG++R Y+ R G
Sbjct: 121 -KVRLWD-CRSNSFSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKG 172
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -3
Query: 273 DGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIF 127
D I+ ++ +G+ L GH ++I + YN +++ S S D R++
Sbjct: 77 DKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLW 125
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 26.2 bits (55), Expect = 3.5
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 291 LMTGCLDGSIRAYEGRSGEQCV-ILTGHRSEILDLCYNAKENLILSTSDDGSARIF 127
L++G +D I+ +E + GH I DL ++ LSTS D + +++
Sbjct: 282 LLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLW 337
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 4.6
Identities = 9/48 (18%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 264 IRAYEGRSGEQCVILT--GHRSEILDLCYNAKENLILSTSDDGSARIF 127
+R Y+ + Q ++T GH + + + ++ + ++S+DG+ +++
Sbjct: 63 VRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVW 110
>SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit
Prp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 224 ITHCSPDLPSYARMEPSRHPV 286
I H P LP YA+ +PS H V
Sbjct: 275 IQHPIPVLPPYAKNQPSSHSV 295
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 25.4 bits (53), Expect = 6.1
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 228 VILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSS 109
V L H + ++ +LS S+D SAR++ D +
Sbjct: 373 VRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKT 412
>SPAC12G12.10 |||WD repeat protein, human WDR21
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 420
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 297 NNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDL 190
N ++ GC + S+ Y+ R+ ++CV H S I +
Sbjct: 265 NLVIAGCRNKSVLVYDLRTKKECVQRFYHGSSICSM 300
>SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual
Length = 231
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -3
Query: 351 CTKPENE-VNGVTKMFWVKNNLMTGCLDGSIR 259
CT E V VT FW++ + C D S R
Sbjct: 88 CTHGLQEYVEAVTFKFWLQTGTLLSCKDSSFR 119
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = -3
Query: 576 IDIHPDNSLXASISTDAKVILTTTNNGKIV 487
I+ H D+ + ++D ++ T ++NG+I+
Sbjct: 184 IEAHKDSLACLAFNSDGTMLATASDNGRII 213
>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
E3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 561 DNSLXASISTDAKVILTTTNN 499
+NS +S S +KV LTT NN
Sbjct: 370 ENSFDSSSSCSSKVFLTTRNN 390
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,378,623
Number of Sequences: 5004
Number of extensions: 47985
Number of successful extensions: 218
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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