Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31396
(391 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0388 + 3432177-3433154 35 0.026
07_03_1795 + 29603694-29605208,29605423-29605649,29605739-296060... 33 0.061
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 30 0.57
11_04_0397 - 17230152-17231453 29 0.99
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 29 1.3
05_04_0055 + 17536241-17536729,17537297-17537401 29 1.3
01_01_1177 - 9378230-9378301,9378385-9378498,9379641-9379786,938... 29 1.7
05_03_0179 - 9257066-9258946 28 2.3
02_04_0608 - 24308212-24308396,24308579-24308889,24308994-24309034 28 2.3
07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317 28 3.0
03_01_0605 - 4453409-4453692,4454541-4454594,4454706-4454812,445... 28 3.0
02_01_0371 + 2664488-2664862,2664973-2665059,2665155-2665267,266... 28 3.0
01_06_1740 - 39575614-39576981 28 3.0
09_04_0361 - 16948740-16948860,16948951-16949018,16949424-169495... 27 4.0
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 27 4.0
07_01_0795 - 6257985-6258149,6258276-6258380,6259196-6259328,626... 27 4.0
05_04_0310 + 20114415-20117819 27 4.0
10_01_0326 + 3574129-3574329,3575144-3575692,3575914-3576072,357... 27 5.3
08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099 27 5.3
08_01_0295 - 2379181-2379336,2379660-2380324,2381346-2382882 27 5.3
06_03_1267 - 28851286-28851306,28851452-28851520,28852031-288520... 27 5.3
06_02_0090 + 11604017-11604082,11604345-11604397,11604710-11605229 27 5.3
04_04_0159 - 23194738-23194914,23195035-23195190,23195581-23196570 27 5.3
03_02_0586 + 9665148-9665867 27 5.3
02_05_1000 + 33417357-33417600,33417692-33417744,33418376-334184... 27 5.3
02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087... 27 5.3
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152... 27 7.0
10_01_0169 - 1899491-1899666,1901358-1901638,1902468-1902477,190... 27 7.0
08_02_0329 - 15833124-15833825 27 7.0
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058 27 7.0
07_01_0626 - 4681826-4682707 27 7.0
07_01_0511 + 3806475-3806876,3807914-3808039,3808120-3808193,380... 27 7.0
05_05_0392 + 24629528-24630442 27 7.0
05_01_0328 - 2571155-2571627,2571894-2572197 27 7.0
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 26 9.2
10_06_0100 + 10729164-10729562 26 9.2
08_01_0876 - 8598664-8599374 26 9.2
07_01_0466 - 3518315-3521428 26 9.2
03_01_0371 + 2883418-2883967,2884097-2884176,2886283-2886339,288... 26 9.2
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 26 9.2
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 26 9.2
>08_01_0388 + 3432177-3433154
Length = 325
Score = 34.7 bits (76), Expect = 0.026
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 114 PPPRDAGLAVVGATTTSPLGRQAIRSPPRWRRLEWSILRNT----PLGQNQRGLRIA 272
PPPR A A A T G +A+ W E ILR P G+ QR +IA
Sbjct: 144 PPPRHAAAAAAAAATAVSDGGEAVEDAGEWTDQEMDILRRQMVKHPAGEPQRWEKIA 200
>07_03_1795 +
29603694-29605208,29605423-29605649,29605739-29606071,
29606229-29606475,29606948-29607076,29607161-29607376,
29607454-29607577,29608377-29608612
Length = 1008
Score = 33.5 bits (73), Expect = 0.061
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 130 PDWRSSAPRPPALSVGRLSEARLDG 204
P WRSSAP P A+ + RL+++ LDG
Sbjct: 31 PAWRSSAPVPRAVPLSRLTDSFLDG 55
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 30.3 bits (65), Expect = 0.57
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 99 HLSHHPPPRDAGLAVVGATTTSPL 170
H HHPPP L ++ A+TT+PL
Sbjct: 235 HHHHHPPPPPPELQLLPASTTAPL 258
>11_04_0397 - 17230152-17231453
Length = 433
Score = 29.5 bits (63), Expect = 0.99
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 90 CGAHLSHHPPPRDAGLAVVGATTTSPLGRQAIRSPPRW 203
C H +H P PR G A GAT L A+ W
Sbjct: 51 CSLHWAHRPLPRGVGTAAFGATAVLCLAVGAVSLLLSW 88
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 209 PAPSR-RASDSLPTERAGGRGADDRQSGVPRGR 114
P+P R R D R GRG DDR PRGR
Sbjct: 150 PSPHRDRDRDRHAAGRPRGRGDDDRDRDPPRGR 182
>05_04_0055 + 17536241-17536729,17537297-17537401
Length = 197
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 342 EDDVQAALHAFYARAMSIRVMEGRLSSTHAGS 247
EDD Q A+ FYA ++R M G S+ G+
Sbjct: 74 EDDEQRAVERFYALVANVRAMRGMYRSSGDGA 105
>01_01_1177 -
9378230-9378301,9378385-9378498,9379641-9379786,
9380004-9380086,9381178-9381233,9381619-9381822,
9381914-9382159
Length = 306
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 190 LRIACRPRGLVVVAPTTASPAS 125
LR+A RPR L APTTA+ A+
Sbjct: 31 LRLAARPRALSASAPTTAAVAA 52
>05_03_0179 - 9257066-9258946
Length = 626
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 22 TNVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSAPRPP-ALSVGRLSEARL 198
T T + + + ES + EH+ P T+ P S+A PP +L+ + EA +
Sbjct: 156 TKCSTPVPSCAITKSDAESTPTTLEHVFPATMSQSMPSAASAAAAPPVSLTATKEDEADM 215
Query: 199 D 201
D
Sbjct: 216 D 216
>02_04_0608 - 24308212-24308396,24308579-24308889,24308994-24309034
Length = 178
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 197 RRASDSLPTERAGGRGADDRQSGVPRGR 114
RR+S P + A ADD +S V RGR
Sbjct: 50 RRSSPVKPADEAAAAAADDDESDVKRGR 77
>07_01_0925 - 7771465-7772195,7772284-7772431,7773706-7774317
Length = 496
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 218 PF*PAPSRRASDSLPTERAGGRGA 147
P P P R + SLP E+ GGRG+
Sbjct: 39 PSRPPPPPRVAKSLPREQPGGRGS 62
>03_01_0605 -
4453409-4453692,4454541-4454594,4454706-4454812,
4454865-4454928,4456996-4457896
Length = 469
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 209 PAPSRRASDSLPTERAGGRGADDRQSGVPRGR 114
PA SRR S + + GG G DD PRGR
Sbjct: 380 PARSRRWSAGVVPQVDGGGGDDDGTGPKPRGR 411
>02_01_0371 +
2664488-2664862,2664973-2665059,2665155-2665267,
2665506-2665634,2666688-2666793,2667296-2667367,
2667702-2667806
Length = 328
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +1
Query: 55 MKRQRGE---SEAFSAEHISPITLPLGTPDWRSSAPRPPA 165
M+R RG+ S++ + E S IT G+P+W + RPP+
Sbjct: 193 MQRNRGQFTSSKSKAEEATSVITSSEGSPNWGAVEGRPPS 232
>01_06_1740 - 39575614-39576981
Length = 455
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 152 HDHQP-SRSAGYPKPA*MAPVRMVYPTEYPAGSEPAWVEDSRPSITR 289
H P S AG+P P P P P G +PA + D+ SI R
Sbjct: 118 HGRTPWSAPAGHPAPPAAVPEEPQEPRLGPPGLKPAKILDTHKSIER 164
>09_04_0361 -
16948740-16948860,16948951-16949018,16949424-16949510,
16949626-16949694,16949786-16949854,16949944-16950765
Length = 411
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 127 TPDWRSSAPRPPALSVGRLSEARLDGAG*NGLSYG 231
+P + SS +PP+L+VG LS G G YG
Sbjct: 95 SPAYASSRAQPPSLAVGLLSVLAQGATGSKGGIYG 129
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 197 RRASDSLPTERAGGRGAD 144
RRAS +P +R GGRG D
Sbjct: 21 RRASSPIPRDRYGGRGRD 38
>07_01_0795 -
6257985-6258149,6258276-6258380,6259196-6259328,
6260225-6260289,6260569-6261642,6262328-6262433,
6262872-6263044,6263352-6263765
Length = 744
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 114 PPPRDAGLAVVGATTTSPLGRQAIRSPPR 200
PPPR A SP + +R+PPR
Sbjct: 6 PPPRSPAATPDAAAPASPARTRVVRAPPR 34
>05_04_0310 + 20114415-20117819
Length = 1134
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 120 PRDAGLAVVGATTTSPLGRQAIRSPPRWRRLEWSILRNTPLGQNQ-RGLRIAGLPSPG 290
P D ++++G+++ +G+Q + RL+ + + + + N R ++ AGL PG
Sbjct: 102 PNDGKVSLLGSSSIGKIGKQLVGKDESVNRLKAVVEKLSSIRANSGRLMQAAGLTKPG 159
>10_01_0326 +
3574129-3574329,3575144-3575692,3575914-3576072,
3576349-3577543,3577626-3577762,3578052-3578242,
3578888-3579218
Length = 920
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 117 PPRDAGLAVVGATTTSPLGRQAIRS 191
PP+D G A V T TSP ++RS
Sbjct: 672 PPQDVGAAGVHHTDTSPATHSSVRS 696
>08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099
Length = 621
Score = 27.1 bits (57), Expect = 5.3
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 158 GRGADDR--QSGVP-RGRVMGEMCSALNASLSPLCLFMSFVSCEVWT 27
GR A D+ ++G P R R G+ CS N SL L + S WT
Sbjct: 145 GRPASDKKKEAGAPSRERPTGKWCSVHNTSLHDLADCRAVKSLAEWT 191
>08_01_0295 - 2379181-2379336,2379660-2380324,2381346-2382882
Length = 785
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 276 GRLSSTHAGSDPAGYSVG*TILTG 205
GR+ +TH G D A +G +++TG
Sbjct: 199 GRVYTTHLGGDQAAVELGGSVITG 222
>06_03_1267 -
28851286-28851306,28851452-28851520,28852031-28852066,
28852381-28852486,28852869-28852997,28853685-28853797,
28853907-28853993,28854106-28854543
Length = 332
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 55 MKRQRGE---SEAFSAEHISPITLPLGTPDWRSSAPRPPA 165
M+R RG+ S+ E S +T G+P+W S RPP+
Sbjct: 214 MQRNRGQFTSSKPKGDEATSELTASDGSPNWGSVEGRPPS 253
>06_02_0090 + 11604017-11604082,11604345-11604397,11604710-11605229
Length = 212
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 PPPRDAG-LAVVGATTTSPLGRQAIRSPPR 200
PPPR G L V A+ SP GR+ + PPR
Sbjct: 149 PPPRPGGRLVPVAASPGSP-GRRLAQPPPR 177
>04_04_0159 - 23194738-23194914,23195035-23195190,23195581-23196570
Length = 440
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 206 APSRRASDSLPTERAGGRGADDRQSGVP 123
A + ASD P +RA GA+DR S +P
Sbjct: 4 AAAAAASDEPPRKRARSAGAEDRLSELP 31
>03_02_0586 + 9665148-9665867
Length = 239
Score = 27.1 bits (57), Expect = 5.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 167 SRSAGYPKPA*MAPVRMVYPTEYPAGSEP 253
S A P PA MA VR+V +P G P
Sbjct: 34 SSGAAGPPPALMADVRVVVRRHFPVGPNP 62
>02_05_1000 +
33417357-33417600,33417692-33417744,33418376-33418413,
33418720-33419114,33420092-33420221,33420512-33421343
Length = 563
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 147 GATTTSPLGRQAIRSPPRWRRLEWSILRNTPL 242
G TTTS G +PP+W +LE ++L + PL
Sbjct: 382 GCTTTSSNGGGVGVAPPQWPKLE-ALLPSRPL 412
>02_05_0999 +
33405982-33408279,33408356-33408466,33408551-33408703,
33408870-33409033,33409113-33409210,33409296-33409474,
33409588-33409675,33410285-33410451
Length = 1085
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 307 CKSNEHPGDGRPAILNPRW 251
C+S H G G P ++PRW
Sbjct: 304 CRSPFHKGQGDPRYVDPRW 322
>11_06_0645 -
25814302-25814759,25814853-25815005,25815032-25815214,
25815342-25815531,25815624-25815784,25816136-25816623,
25817035-25817075
Length = 557
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 LSHHPPPRDAG-LAVVGATTTSPLGRQAIRSPPRWRRLEWS 221
LS PP R A + G + +SP G R RWRR E S
Sbjct: 497 LSTPPPVRGAASMRNRGISFSSPRGTGGRRGTGRWRRAEGS 537
>10_01_0169 -
1899491-1899666,1901358-1901638,1902468-1902477,
1902696-1902786,1903993-1904031,1904117-1904405,
1904488-1904658,1904737-1905623,1905711-1906157,
1906236-1906460,1906536-1906943
Length = 1007
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 194 RASDSLPTERAGGRG 150
R SD+LP+ R+GGRG
Sbjct: 880 RGSDALPSARSGGRG 894
>08_02_0329 - 15833124-15833825
Length = 233
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 275 AGYPQPTLVLTQRGIP*DRPF*PAPSRRASDSLPTERAGG 156
A P P L + G P P PA RRAS PT+R G
Sbjct: 188 AAPPLPPLPVLAAGPPPPTP--PARRRRASPPAPTQRTRG 225
>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
Length = 484
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 206 APSRRASDSLPTERAGGRGADDRQSGVPRGRVMGEMCSALNA 81
AP R ++ GG G +DR S +P V+G + S L A
Sbjct: 9 APRRDDGEAAGPSGGGGGGGEDRLSALP-DAVLGRIVSHLKA 49
>07_01_0626 - 4681826-4682707
Length = 293
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 13 LSTTNVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSAPRPPALSV 174
++ T T + + R ES + EH+ P T+ TP ++A P+ S+
Sbjct: 33 MTPTKCLTLGPSSITTRPAVESSLAAPEHVFPATMNSSTPSTTAAAIATPSPSI 86
>07_01_0511 +
3806475-3806876,3807914-3808039,3808120-3808193,
3808278-3808347,3808431-3808486,3808578-3808649,
3808678-3808811,3808967-3809030,3809111-3809240,
3809326-3809541,3809629-3809750,3810527-3810701,
3810788-3810878,3811040-3811197,3811330-3811518,
3813257-3813340,3813362-3813536,3815300-3815955,
3816226-3816648,3816752-3816790
Length = 1151
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 221 RPF*PAPSRRASDSLPTERAGGRGADDRQSG-VPRGR 114
+P PAP R P G +GA R+ G PRGR
Sbjct: 29 KPALPAPQRAGKRVPPPAIRGRKGAAGRRGGAAPRGR 65
>05_05_0392 + 24629528-24630442
Length = 304
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 99 HLSHHPPPRDAGLAVVGA 152
H S PPP+DAG + GA
Sbjct: 259 HCSSPPPPQDAGASAAGA 276
>05_01_0328 - 2571155-2571627,2571894-2572197
Length = 258
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 200 SRRASDSLPTERAGGRGADDRQSGVPRGRVMGEMCSAL 87
SRR S ++ T R G RGA + G R + CS++
Sbjct: 8 SRRRSWAVQTTRKGARGAAEDVRGSARRASVSRRCSSV 45
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 1 KTSCLSTTNVQTSHETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSSAP 153
++S S + ++ S + M R R S A + P L TP WR S P
Sbjct: 145 RSSRSSASPIRLSPSPRSMSRTRPSSAASRSS--PPFALQPPTPSWRPSTP 193
>10_06_0100 + 10729164-10729562
Length = 132
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 114 PPPRDAGLAVVGATTTSPLGRQAIRSPPRW 203
P P A+ GATTT + PRW
Sbjct: 42 PSPTATATAIAGATTTGAAASSSGGEQPRW 71
>08_01_0876 - 8598664-8599374
Length = 236
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 108 HHPPPRDAGLAVVGATTTSPLGRQAIRSPPR 200
H PPPR + PL R+A SPPR
Sbjct: 6 HSPPPRHRTSSSPPHRCVEPLHRRAPLSPPR 36
>07_01_0466 - 3518315-3521428
Length = 1037
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 114 PPPRDAGLAVVG 149
PPPRDAG+AV G
Sbjct: 465 PPPRDAGIAVRG 476
>03_01_0371 +
2883418-2883967,2884097-2884176,2886283-2886339,
2887152-2887207,2888006-2888079,2889511-2889798,
2890043-2890120,2890359-2890882,2891315-2891438,
2891619-2891767,2891983-2892137,2892477-2892682,
2892768-2892901,2892983-2893284,2893514-2893617,
2893858-2893928
Length = 983
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -3
Query: 251 VLTQRGIP*DRPF*PAPSRRASDSLPTERAGGRGADDRQSGVPRGR 114
V T G+ D P+ P+P +D+ + G D ++ VP G+
Sbjct: 308 VTTLEGLIADDPYHPSPEDEDTDNGDVDIGGDSADADSKNSVPTGK 353
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 102 LSHHPPPRDAGLAVVGATTTSPLGRQAIRSPPR-WRRL 212
+S PP D G ++ + PL R RSP R +RR+
Sbjct: 551 VSRSPPTMDKGRSISRTSGRLPLRRSISRSPDRPYRRI 588
>01_06_1507 -
37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 43 ETKLMKRQRGESEAFSAEHISPITLPLGTPDWRSS--APRPPALSVGRLSEARLD 201
+T L R +S+ F++E+ + LG P WR + A + G++ E R D
Sbjct: 512 KTMLKDALREKSDVFNSENPEEDKIKLGEPGWRERYYEEKFGARTPGQIEEIRRD 566
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,022,227
Number of Sequences: 37544
Number of extensions: 315283
Number of successful extensions: 1186
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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