Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31396
         (391 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-1|CAE17827.1|  160|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro...    27   6.2  
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical...    27   6.2  
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    26   8.2  

>Z92833-1|CAE17827.1|  160|Caenorhabditis elegans Hypothetical
           protein F38A6.4 protein.
          Length = 160

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 93  GAHLSHHPPPRDAGLAVVGATTTSPLGRQAIRSPPRWRRL 212
           GA +S  PPP    +  +G++   P+GR   R PP  R L
Sbjct: 51  GATMSKTPPPDLPDMGPIGSSGPDPIGR-FNRVPPGPREL 89


>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
           preproprotein protein.
          Length = 1042

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 136 WRSSAPRPPALSVGRLSE 189
           WRSSAP  PA S G+L++
Sbjct: 897 WRSSAPISPASSSGQLTD 914


>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y37D8A.13 protein.
          Length = 1042

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 136 WRSSAPRPPALSVGRLSE 189
           WRSSAP  PA S G+L++
Sbjct: 897 WRSSAPISPASSSGQLTD 914


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 103 SPITLPLGTPDWRSSAPRPPALSVGRLSEARLDG 204
           +P  +P G+P +  SAP P A++   + + R+ G
Sbjct: 454 APGKMPFGSPSFPQSAPSPAAMAA--MQQGRMPG 485


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,749,113
Number of Sequences: 27780
Number of extensions: 206987
Number of successful extensions: 542
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)