Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31378
         (442 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA...   124   5e-29
BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p pro...    44   7e-05

>AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA
           protein.
          Length = 416

 Score =  124 bits (299), Expect = 5e-29
 Identities = 63/83 (75%), Positives = 65/83 (78%)
 Frame = +1

Query: 193 NLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRXKV 372
           N AA KRGTGGRSSFNGIVATVFG TGFVGRYVCNKLGK GTQ+ILPYRGD  D  R KV
Sbjct: 47  NPAAMKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKV 106

Query: 373 CGDLCQVLFTPYHLLDEESIAKA 441
            GDL QVLF  Y+L D  SI  A
Sbjct: 107 TGDLGQVLFHFYNLEDPASIRDA 129


>BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p
           protein.
          Length = 327

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 24/40 (60%), Positives = 26/40 (65%)
 Frame = +1

Query: 322 LILPYRGDFYDAQRXKVCGDLCQVLFTPYHLLDEESIAKA 441
           +ILPYRGD  D  R KV GDL QVLF  Y+L D  SI  A
Sbjct: 1   MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDA 40


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,353,241
Number of Sequences: 53049
Number of extensions: 334789
Number of successful extensions: 875
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)