Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31378
         (442 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   6.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 10  SLSILNGEYYQLYKYELSQYLSHKM 84
           S S+ +  +Y++YK  +  Y S+KM
Sbjct: 410 STSMKDPAFYRIYKRIIDYYHSYKM 434


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 10  SLSILNGEYYQLYKYELSQYLSHKM 84
           S S+ +  +Y++YK  +  Y S+KM
Sbjct: 410 STSMKDPAFYRIYKRIIDYYHSYKM 434


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 257 FSVAPDLSDAMCATNWEKLVPS*FYHTEAI 346
           FS +P+LS+      + + +PS  Y  +A+
Sbjct: 242 FSTSPELSNKQRFEYFTRTIPSDHYQVKAM 271


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 361 FGHHRNRLCMVKLTGYQFFPIC 296
           FGHH NRL     T + F   C
Sbjct: 318 FGHHLNRLGREISTYFTFTRPC 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,543
Number of Sequences: 438
Number of extensions: 1973
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)