Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31371
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 33 0.11
03_02_0550 + 9407280-9407375,9407474-9407560,9408230-9408317,940... 33 0.11
05_04_0020 - 17199627-17199947,17200129-17200203,17200301-172003... 32 0.33
01_03_0042 - 11893004-11893645 32 0.33
01_01_0044 - 326337-326500,326618-327398 32 0.33
07_03_1661 + 28441201-28441987,28442092-28442171,28442442-284425... 30 1.0
03_02_0573 - 9571040-9571234,9571352-9571444,9571735-9571818,957... 30 1.0
06_03_0052 - 16027570-16027617,16027789-16027795,16028103-160283... 30 1.3
12_01_0947 - 9396320-9396483,9396822-9397025,9397769-9398009,939... 29 1.7
12_01_0941 - 9316051-9316056,9316747-9317082 29 1.7
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 29 1.7
02_05_1360 + 35942493-35942682,35942799-35942858,35943099-359432... 29 1.7
01_06_1271 + 35890317-35890762,35891113-35891173,35891669-358918... 29 1.7
01_01_0043 - 321810-321973,322054-322846 29 1.7
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 29 3.1
02_02_0139 + 7122880-7122979,7123328-7123560,7123961-7124032,712... 28 4.0
12_01_0937 - 9289999-9290046,9290123-9290458 28 5.3
02_04_0636 - 24648288-24648740,24648902-24649049,24650165-24650703 28 5.3
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 28 5.3
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 27 7.1
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 27 7.1
05_01_0129 - 872127-872681,872762-873070,873180-873347 27 7.1
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 27 9.3
03_01_0004 + 41829-42203,42376-42474,42699-42743,43604-43741,438... 27 9.3
02_04_0069 - 19450322-19450348,19451247-19451319,19451535-194517... 27 9.3
01_01_0968 - 7618357-7618529,7618891-7619094,7620896-7621139,762... 27 9.3
01_01_0097 - 741881-742977,743100-743320,743438-744156 27 9.3
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 32 RVLILGGCGFIGRNLVDYLIRNDLVSGLRVVDKTPS 139
RVL++GG G+IGR +V R D ++ + V D P+
Sbjct: 10 RVLVIGGTGYIGRYIVAASAREDHLTSVLVRDPAPA 45
>03_02_0550 +
9407280-9407375,9407474-9407560,9408230-9408317,
9408871-9408962,9409068-9409132,9409220-9409308,
9409402-9409479,9409567-9409660,9409745-9409811,
9409907-9409970,9410096-9410136,9410221-9410412
Length = 350
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 32 RVLILGGCGFIGRNLVDYLIRND 100
R+L+ GG GFIG +LVD L+ N+
Sbjct: 36 RILVTGGAGFIGSHLVDKLMENE 58
>05_04_0020 -
17199627-17199947,17200129-17200203,17200301-17200384,
17200483-17200562,17201354-17201508,17202602-17203215
Length = 442
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 32 RVLILGGCGFIGRNLVDYLI-RNDLV 106
RVL+ GG GF+G +LVD L+ R D V
Sbjct: 126 RVLVTGGAGFVGSHLVDRLVERGDSV 151
>01_03_0042 - 11893004-11893645
Length = 213
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 32 RVLILGGCGFIGRNLVDYLI-RNDLV 106
RVL+ GG GF+G +LVD L+ R D V
Sbjct: 114 RVLVTGGAGFVGSHLVDRLVERGDSV 139
>01_01_0044 - 326337-326500,326618-327398
Length = 314
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 14 GDNSKPRVLILGGCGFIGRNLV 79
G+ K R+L++GG G+IGR++V
Sbjct: 5 GEEKKSRILVVGGTGYIGRHVV 26
>07_03_1661 +
28441201-28441987,28442092-28442171,28442442-28442525,
28443181-28443255,28443704-28444015
Length = 445
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 32 RVLILGGCGFIGRNLVDYLI-RNDLV 106
RV++ GG GF+G +LVD L+ R D V
Sbjct: 127 RVVVTGGAGFVGSHLVDRLLARGDSV 152
>03_02_0573 -
9571040-9571234,9571352-9571444,9571735-9571818,
9572401-9572480,9572609-9572759,9573067-9573579
Length = 371
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 32 RVLILGGCGFIGRNLVDYLI-RNDLV 106
RV++ GG GF+G +LVD L+ R D V
Sbjct: 109 RVVVTGGAGFVGSHLVDELLARGDSV 134
>06_03_0052 -
16027570-16027617,16027789-16027795,16028103-16028341,
16028432-16028566,16028670-16028888
Length = 215
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 14 GDNSKPRVLILGGCGFIGRNLV 79
GD +K R+LI+GG G +G+ +V
Sbjct: 4 GDRNKSRILIIGGTGHLGKFIV 25
>12_01_0947 -
9396320-9396483,9396822-9397025,9397769-9398009,
9399052-9399387
Length = 314
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 26 KPRVLILGGCGFIGRNLV 79
K RVL++GG GF+GR +V
Sbjct: 5 KSRVLVVGGTGFVGRRVV 22
>12_01_0941 - 9316051-9316056,9316747-9317082
Length = 113
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 26 KPRVLILGGCGFIGRNLV 79
K RVLI+GG G+IGR +V
Sbjct: 5 KSRVLIVGGSGYIGRRIV 22
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 26 KPRVLILGGCGFIGRNLV 79
K RVLI+GG G+IGR +V
Sbjct: 3 KSRVLIVGGTGYIGRRIV 20
>02_05_1360 +
35942493-35942682,35942799-35942858,35943099-35943217,
35945405-35945449,35945598-35945676,35945777-35945838,
35945932-35946037,35946193-35946253,35947097-35947167,
35947459-35947598,35947887-35947994
Length = 346
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 8 TTGDNSKPRVLILGGCGFIGRNLVDYLIRND 100
T G +S V I G GF+GR LV L+ D
Sbjct: 35 TDGPSSTMTVSITGATGFVGRRLVQKLLSED 65
>01_06_1271 +
35890317-35890762,35891113-35891173,35891669-35891813,
35891903-35891982,35892465-35892548,35892644-35892718,
35893150-35893242,35893315-35893503
Length = 390
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 32 RVLILGGCGFIGRNLVDYLI 91
RV++ GG GF+G +LVD L+
Sbjct: 102 RVVVTGGAGFVGSHLVDRLL 121
>01_01_0043 - 321810-321973,322054-322846
Length = 318
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 23 SKPRVLILGGCGFIGRNLVDYLIRNDLVSGLRVVDKTPS 139
+K R+L++GG G+IGR++V R + V D PS
Sbjct: 10 TKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPS 48
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 11 TGDNSKPRVLILGGCGFIGRNLVDYLI 91
TGD+S V + GG GFIG LV L+
Sbjct: 4 TGDSSGALVCVTGGSGFIGSWLVRLLL 30
>02_02_0139 +
7122880-7122979,7123328-7123560,7123961-7124032,
7124257-7124334,7124529-7124579,7124654-7124703,
7124807-7124915,7125023-7125223
Length = 297
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 221 IN*ICAFVFNAGVLKCFRMCRVQESQLSSGSCPQH 117
+N IC +F G+ C CR + + G CP H
Sbjct: 115 LNFICFTIFLGGL--CLSSCRARVLVVKEGKCPSH 147
>12_01_0937 - 9289999-9290046,9290123-9290458
Length = 127
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 26 KPRVLILGGCGFIGRNLV 79
K RVLI+GG G IGR +V
Sbjct: 5 KSRVLIVGGTGHIGRRIV 22
>02_04_0636 - 24648288-24648740,24648902-24649049,24650165-24650703
Length = 379
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 171 KTFEDPRVEYKSANLINQ----TSCASALDPGDDAPW 269
K R+EYK IN+ AS LDP D PW
Sbjct: 213 KNARTKRIEYKQRLKINKYYVAIDTASGLDPATDLPW 249
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 165 HSKTFEDPRVEYKSANLINQTSCASALDPGDDAPWGLVVN 284
+S EDP + + LI TS + +P + PWGL+++
Sbjct: 299 YSSPLEDPGISAEEKKLI--TSQTTGGEPVKEIPWGLILS 336
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 NSRRSDRGGLCGRNRHPQPERGQALRQDE 382
++RR DR G N HP +RG+ R+DE
Sbjct: 302 DARRRDRKGKYN-NDHPDADRGRGWRRDE 329
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 317 GGLCGRNRH---PQPERGQALRQDEVP 388
GGL GR R P PERG A R+D P
Sbjct: 122 GGLTGRRRRNDTPSPERGGAGRKDLSP 148
>05_01_0129 - 872127-872681,872762-873070,873180-873347
Length = 343
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -1
Query: 482 IRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEGDDSF 330
+RP++ +G W C + L S+P V H ++ A DD++
Sbjct: 191 MRPAVPRGYFGNLVLWAFPRCAAGELASRP--VQHAAKLIRRAVARADDAY 239
>12_01_0671 -
5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +3
Query: 177 FEDPRVEYKSANLINQTSCASALDPGDDAPWGLVVNCASETRGGQTEAVYAEGIVTLSLN 356
F+ PR K++ + S L PG++ P G+ C G T + + S+N
Sbjct: 439 FQGPRGTGKTSTARIFSMGLSCLAPGENKPCGICKECTDFLSGNGTNLIEVDASNRKSIN 498
Query: 357 VAKH 368
K+
Sbjct: 499 RIKN 502
>03_01_0004 +
41829-42203,42376-42474,42699-42743,43604-43741,
43852-44157,44779-45689,45826-46093
Length = 713
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 68 RNLVDYLIRNDLVSGLRVVDKTPSSTGFPEPYTF 169
R L+DYL+R D V+ L+ +D S G + F
Sbjct: 617 RKLLDYLVRYDAVTYLKYLDTLRVSEGVRSVWIF 650
>02_04_0069 -
19450322-19450348,19451247-19451319,19451535-19451790,
19451808-19452057
Length = 201
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 282 NCASETRGGQTEAVYAEGIVTLSLNVAK 365
N ETR G + +YA G+ + VA+
Sbjct: 50 NMVKETRSGNVDHLYASGVAAMGAKVAQ 77
>01_01_0968 -
7618357-7618529,7618891-7619094,7620896-7621139,
7623008-7623151,7623272-7623487
Length = 326
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 8 TTGDNSKPRVLILGGCGFIGRNLV 79
T N+ +L++GG G IGR++V
Sbjct: 4 TKKSNNDSTILVIGGTGIIGRHIV 27
>01_01_0097 - 741881-742977,743100-743320,743438-744156
Length = 678
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 240 ALDPGDDAPWGLVVNCASETR 302
ALDPG A W VNC+ R
Sbjct: 122 ALDPGPGATWVSFVNCSQAVR 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,952,374
Number of Sequences: 37544
Number of extensions: 344056
Number of successful extensions: 937
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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