BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31371
(527 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074099-1|BAB84925.1| 1310|Homo sapiens FLJ00170 protein protein. 31 1.9
BC146774-1|AAI46775.1| 1114|Homo sapiens GPR124 protein protein. 31 2.5
AY181242-1|AAO27354.1| 1331|Homo sapiens G protein-coupled recep... 31 2.5
AY090637-1|AAM09084.1| 320|Homo sapiens tumor endothelial marke... 31 2.5
AK027296-1|BAB55022.1| 185|Homo sapiens protein ( Homo sapiens ... 31 2.5
AF378755-1|AAL11992.1| 1331|Homo sapiens tumor endothelial marke... 31 2.5
AB040964-1|BAA96055.2| 1206|Homo sapiens KIAA1531 protein protein. 31 2.5
BC004929-1|AAH04929.1| 369|Homo sapiens hydroxy-delta-5-steroid... 30 4.4
AK057436-1|BAB71486.1| 196|Homo sapiens protein ( Homo sapiens ... 30 4.4
AF277719-1|AAG37824.1| 369|Homo sapiens 3 beta-hydroxy-delta 5-... 30 4.4
BC009819-1|AAH09819.2| 420|Homo sapiens UDP-glucuronate decarbo... 30 5.8
AY358541-1|AAQ88905.1| 420|Homo sapiens UXS1 protein. 30 5.8
AY147934-1|AAN39844.1| 420|Homo sapiens UDP-glucuronic acid dec... 30 5.8
AK075170-1|BAC11448.1| 425|Homo sapiens protein ( Homo sapiens ... 30 5.8
AK075120-1|BAC11415.1| 420|Homo sapiens protein ( Homo sapiens ... 30 5.8
>AK074099-1|BAB84925.1| 1310|Homo sapiens FLJ00170 protein protein.
Length = 1310
Score = 31.5 bits (68), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 521 PPMFFSSCXTLLFIRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEG 342
P + + TLL I + SF GLSL + LR+ + PGA LG + +
Sbjct: 51 PGLLPNGTVTLLLSNKKIT--GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKR 108
Query: 341 DDSFRINRLG-LTSASF 294
D NR+G LTS +F
Sbjct: 109 LD-LSNNRIGCLTSETF 124
>BC146774-1|AAI46775.1| 1114|Homo sapiens GPR124 protein protein.
Length = 1114
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 521 PPMFFSSCXTLLFIRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEG 342
P + + TLL I + SF GLSL + LR+ + PGA LG + +
Sbjct: 72 PGLLPNGTVTLLLSNNKIT--GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKR 129
Query: 341 DDSFRINRLG-LTSASF 294
D NR+G LTS +F
Sbjct: 130 LD-LSNNRIGCLTSETF 145
>AY181242-1|AAO27354.1| 1331|Homo sapiens G protein-coupled receptor
124 protein.
Length = 1331
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 521 PPMFFSSCXTLLFIRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEG 342
P + + TLL I + SF GLSL + LR+ + PGA LG + +
Sbjct: 72 PGLLPNGTVTLLLSNNKIT--GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKR 129
Query: 341 DDSFRINRLG-LTSASF 294
D NR+G LTS +F
Sbjct: 130 LD-LSNNRIGCLTSETF 145
>AY090637-1|AAM09084.1| 320|Homo sapiens tumor endothelial marker 5
precursor protein.
Length = 320
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 521 PPMFFSSCXTLLFIRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEG 342
P + + TLL I + SF GLSL + LR+ + PGA LG + +
Sbjct: 79 PGLLPNGTVTLLLSNNKIT--GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKR 136
Query: 341 DDSFRINRLG-LTSASF 294
D NR+G LTS +F
Sbjct: 137 LD-LSNNRIGCLTSETF 152
>AK027296-1|BAB55022.1| 185|Homo sapiens protein ( Homo sapiens
cDNA FLJ14390 fis, clone HEMBA1003071, weakly similar to
INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN COMPLEX ACID
LABILE ).
Length = 185
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 521 PPMFFSSCXTLLFIRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEG 342
P + + TLL I + SF GLSL + LR+ + PGA LG + +
Sbjct: 79 PGLLPNGTVTLLLSNNKIT--GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKR 136
Query: 341 DDSFRINRLG-LTSASF 294
D NR+G LTS +F
Sbjct: 137 LD-LSNNRIGCLTSETF 152
>AF378755-1|AAL11992.1| 1331|Homo sapiens tumor endothelial marker 5
precursor protein.
Length = 1331
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 521 PPMFFSSCXTLLFIRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEG 342
P + + TLL I + SF GLSL + LR+ + PGA LG + +
Sbjct: 72 PGLLPNGTVTLLLSNNKIT--GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKR 129
Query: 341 DDSFRINRLG-LTSASF 294
D NR+G LTS +F
Sbjct: 130 LD-LSNNRIGCLTSETF 145
>AB040964-1|BAA96055.2| 1206|Homo sapiens KIAA1531 protein protein.
Length = 1206
Score = 31.1 bits (67), Expect = 2.5
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -1
Query: 521 PPMFFSSCXTLLFIRPSIVQGSIEQSSFWGLSLCTSVHLRSQPALVLHPGAVLGHVQAEG 342
P + + TLL I + SF GLSL + LR+ + PGA LG + +
Sbjct: 164 PGLLPNGTVTLLLSNNKIT--GLRNGSFLGLSLLEKLDLRNNIISTVQPGAFLGLGELKR 221
Query: 341 DDSFRINRLG-LTSASF 294
D NR+G LTS +F
Sbjct: 222 LD-LSNNRIGCLTSETF 237
>BC004929-1|AAH04929.1| 369|Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase 7
protein.
Length = 369
Score = 30.3 bits (65), Expect = 4.4
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 38 LILGGCGFIGRNLVDYLI-RNDLVSGLRVVDK 130
L+ GGCGF+G ++V L+ R + LRV D+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQ 44
>AK057436-1|BAB71486.1| 196|Homo sapiens protein ( Homo sapiens
cDNA FLJ32874 fis, clone TESTI2004000, highly similar to
Rattus norvegicus cca2 mRNA. ).
Length = 196
Score = 30.3 bits (65), Expect = 4.4
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 38 LILGGCGFIGRNLVDYLI-RNDLVSGLRVVDK 130
L+ GGCGF+G ++V L+ R + LRV D+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQ 44
>AF277719-1|AAG37824.1| 369|Homo sapiens 3 beta-hydroxy-delta
5-C27-steroid oxidoreductase protein.
Length = 369
Score = 30.3 bits (65), Expect = 4.4
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 38 LILGGCGFIGRNLVDYLI-RNDLVSGLRVVDK 130
L+ GGCGF+G ++V L+ R + LRV D+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQ 44
>BC009819-1|AAH09819.2| 420|Homo sapiens UDP-glucuronate
decarboxylase 1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 17 DNSKPRVLILGGCGFIGRNLVDYLI 91
+ + R+LI GG GF+G +L D L+
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLM 109
>AY358541-1|AAQ88905.1| 420|Homo sapiens UXS1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 17 DNSKPRVLILGGCGFIGRNLVDYLI 91
+ + R+LI GG GF+G +L D L+
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLM 109
>AY147934-1|AAN39844.1| 420|Homo sapiens UDP-glucuronic acid
decarboxylase protein.
Length = 420
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 17 DNSKPRVLILGGCGFIGRNLVDYLI 91
+ + R+LI GG GF+G +L D L+
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLM 109
>AK075170-1|BAC11448.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ90689 fis, clone PLACE1006219, weakly similar to
PUTATIVE UDP-GLUCOSE 4-EPIMERASE (EC 5.1.3.2). ).
Length = 425
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 17 DNSKPRVLILGGCGFIGRNLVDYLI 91
+ + R+LI GG GF+G +L D L+
Sbjct: 90 EKDRKRILITGGAGFVGSHLTDKLM 114
>AK075120-1|BAC11415.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ90639 fis, clone PLACE1003845, highly similar to
UDP-glucuronate decarboxylase 1. ).
Length = 420
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 17 DNSKPRVLILGGCGFIGRNLVDYLI 91
+ + R+LI GG GF+G +L D L+
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLM 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,136,835
Number of Sequences: 237096
Number of extensions: 1771800
Number of successful extensions: 4034
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4034
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -