BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31368
(459 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-P... 248 3e-66
AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-P... 248 3e-66
U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog pro... 247 5e-66
AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p pro... 247 5e-66
BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p pro... 169 2e-42
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 29 4.0
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro... 28 5.3
AY047535-1|AAK77267.1| 640|Drosophila melanogaster GH04440p pro... 28 5.3
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ... 28 5.3
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA... 28 6.9
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 27 9.2
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 27 9.2
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 27 9.2
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein. 27 9.2
>AE014296-3758|AAF45440.2| 231|Drosophila melanogaster CG17521-PA,
isoform A protein.
Length = 231
Score = 248 bits (607), Expect = 3e-66
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +3
Query: 15 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71
Query: 195 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQLG 362
QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQ G
Sbjct: 72 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTG 127
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 356 TGMRGAFGKPQGTVARVRIGQPIMSVRSIDRWKA 457
TGMRGAFGKPQGTVARVRIGQPIMSVRS DR+KA
Sbjct: 126 TGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKA 159
>AE014296-3757|AAG22453.3| 237|Drosophila melanogaster CG17521-PB,
isoform B protein.
Length = 237
Score = 248 bits (607), Expect = 3e-66
Identities = 109/116 (93%), Positives = 113/116 (97%)
Frame = +3
Query: 15 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77
Query: 195 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQLG 362
QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQ G
Sbjct: 78 QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTG 133
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 356 TGMRGAFGKPQGTVARVRIGQPIMSVRSIDRWKA 457
TGMRGAFGKPQGTVARVRIGQPIMSVRS DR+KA
Sbjct: 132 TGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKA 165
>U49721-1|AAC16108.1| 218|Drosophila melanogaster QM homolog
protein.
Length = 218
Score = 247 bits (605), Expect = 5e-66
Identities = 109/114 (95%), Positives = 112/114 (98%)
Frame = +3
Query: 21 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 200
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 201 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQLG 362
SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQ G
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTG 114
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 356 TGMRGAFGKPQGTVARVRIGQPIMSVRSIDRWKA 457
TGMRGAFGKPQGTVARVRIGQPIMSVRS DR+KA
Sbjct: 113 TGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKA 146
>AY070910-1|AAL48532.1| 218|Drosophila melanogaster RE02339p
protein.
Length = 218
Score = 247 bits (605), Expect = 5e-66
Identities = 109/114 (95%), Positives = 112/114 (98%)
Frame = +3
Query: 21 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 200
MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 201 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQLG 362
SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQ G
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTG 114
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 356 TGMRGAFGKPQGTVARVRIGQPIMSVRSIDRWKA 457
TGMRGAFGKPQGTVARVRIGQPIMSVRS DR+KA
Sbjct: 113 TGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKA 146
>BT003580-1|AAO39584.1| 197|Drosophila melanogaster LD24589p
protein.
Length = 197
Score = 169 bits (411), Expect = 2e-42
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +3
Query: 15 ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 194
+ MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 5 VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64
Query: 195 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 290
QLSSEALEAGRICCNK ++ G D+ MR
Sbjct: 65 QLSSEALEAGRICCNK-MLSCAGADRLQTGMR 95
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 356 TGMRGAFGKPQGTVARVRIGQPIMSVRSIDRWKA 457
TGMRGAFGKPQGTVARVRIGQPIMSVRS DR+KA
Sbjct: 92 TGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKA 125
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 219 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 79
PPK S+ +RTP+ + S+ R SWD V+ R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590
>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
Length = 1233
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
H++ I G R A CY + + +P SR R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143
>AY047535-1|AAK77267.1| 640|Drosophila melanogaster GH04440p
protein.
Length = 640
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
H++ I G R A CY + + +P SR R V
Sbjct: 519 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 550
>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
protein.
Length = 1233
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 3 HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 98
H++ I G R A CY + + +P SR R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143
>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
protein.
Length = 1995
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 177 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 55
P+ R V S S+S S P G D PD+ SI++ Y C
Sbjct: 410 PAPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Frame = +3
Query: 72 PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 233
P S CRGV P I D K T D +LV +Q + + L
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333
Query: 234 CNKYLVKNCGKDQFHI 281
K ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Frame = +3
Query: 72 PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 233
P S CRGV P I D K T D +LV +Q + + L
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333
Query: 234 CNKYLVKNCGKDQFHI 281
K ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Frame = +3
Query: 72 PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 233
P S CRGV P I D K T D +LV +Q + + L
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333
Query: 234 CNKYLVKNCGKDQFHI 281
K ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349
>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
Length = 1990
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 177 PSARTVESRQRSLS--SYPNRRYGSWDQVHPDRTSISDTVYFC 55
P R V S S+S S P G D PD+ SI++ Y C
Sbjct: 410 PGPRHVGSTASSVSQPSQPQSEVGILDLSMPDKNSITEVCYVC 452
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,219,453
Number of Sequences: 53049
Number of extensions: 541857
Number of successful extensions: 1670
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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