Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31360
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D63876-1|BAA09926.1|  692|Homo sapiens KIAA0154 protein.               33   1.3  
BC070044-1|AAH70044.1|  690|Homo sapiens golgi associated, gamma...    33   1.3  
AF219139-1|AAF42849.1|  690|Homo sapiens GGA3 short isoform prot...    33   1.3  
AF219138-1|AAF42848.1|  723|Homo sapiens GGA3 long isoform protein.    33   1.3  
AF190864-1|AAF05709.1|  690|Homo sapiens ADP-ribosylation factor...    33   1.3  
Z83844-1|CAI20369.1|  639|Homo sapiens golgi associated, gamma a...    31   5.0  
CR456493-1|CAG30379.1|  656|Homo sapiens GGA1 protein.                 31   5.0  
BC044629-1|AAH44629.1|  552|Homo sapiens golgi associated, gamma...    31   5.0  
AL035496-1|CAI20951.1|  639|Homo sapiens golgi associated, gamma...    31   5.0  
AK075256-1|BAC11501.1|  639|Homo sapiens protein ( Homo sapiens ...    31   5.0  
AF233521-1|AAF35393.1|  639|Homo sapiens gamma-adaptin related p...    31   5.0  
AF218584-1|AAF42847.1|  639|Homo sapiens GGA1 protein.                 31   5.0  
AF190862-1|AAF05707.1|  639|Homo sapiens ADP-ribosylation factor...    31   5.0  

>D63876-1|BAA09926.1|  692|Homo sapiens KIAA0154 protein.
          Length = 692

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
 Frame = +3

Query: 369 VKSRITEVRDARWSDFLXRLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSSRLAA 530
           VK+++ E+  + W+  L   A  + +Y+ L R   ++SD  +    T+ P   P  +   
Sbjct: 79  VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 137

Query: 531 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           FDD+EK++LLA  L+++     Q  + +   +V  +  R
Sbjct: 138 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 176


>BC070044-1|AAH70044.1|  690|Homo sapiens golgi associated, gamma
           adaptin ear containing, ARF binding protein 3 protein.
          Length = 690

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
 Frame = +3

Query: 369 VKSRITEVRDARWSDFLXRLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSSRLAA 530
           VK+++ E+  + W+  L   A  + +Y+ L R   ++SD  +    T+ P   P  +   
Sbjct: 77  VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 135

Query: 531 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           FDD+EK++LLA  L+++     Q  + +   +V  +  R
Sbjct: 136 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 174


>AF219139-1|AAF42849.1|  690|Homo sapiens GGA3 short isoform
           protein.
          Length = 690

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
 Frame = +3

Query: 369 VKSRITEVRDARWSDFLXRLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSSRLAA 530
           VK+++ E+  + W+  L   A  + +Y+ L R   ++SD  +    T+ P   P  +   
Sbjct: 77  VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 135

Query: 531 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           FDD+EK++LLA  L+++     Q  + +   +V  +  R
Sbjct: 136 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 174


>AF219138-1|AAF42848.1|  723|Homo sapiens GGA3 long isoform protein.
          Length = 723

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
 Frame = +3

Query: 369 VKSRITEVRDARWSDFLXRLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSSRLAA 530
           VK+++ E+  + W+  L   A  + +Y+ L R   ++SD  +    T+ P   P  +   
Sbjct: 110 VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 168

Query: 531 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           FDD+EK++LLA  L+++     Q  + +   +V  +  R
Sbjct: 169 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 207


>AF190864-1|AAF05709.1|  690|Homo sapiens ADP-ribosylation factor
           binding protein GGA3 protein.
          Length = 690

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
 Frame = +3

Query: 369 VKSRITEVRDARWSDFLXRLAPSQRSYYRLART--LKSDTVV----TMPPLVGPSSRLAA 530
           VK+++ E+  + W+  L   A  + +Y+ L R   ++SD  +    T+ P   P  +   
Sbjct: 77  VKTKVIELLYS-WTMALPEEAKIKDAYHMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPV 135

Query: 531 FDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           FDD+EK++LLA  L+++     Q  + +   +V  +  R
Sbjct: 136 FDDEEKSKLLAKLLKSKNPDDLQEANKLIKSMVKEDEAR 174


>Z83844-1|CAI20369.1|  639|Homo sapiens golgi associated, gamma
           adaptin ear containing, ARF binding protein 1 protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207


>CR456493-1|CAG30379.1|  656|Homo sapiens GGA1 protein.
          Length = 656

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 168 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 224


>BC044629-1|AAH44629.1|  552|Homo sapiens golgi associated, gamma
           adaptin ear containing, ARF binding protein 1 protein.
          Length = 552

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207


>AL035496-1|CAI20951.1|  639|Homo sapiens golgi associated, gamma
           adaptin ear containing, ARF binding protein 1 protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207


>AK075256-1|BAC11501.1|  639|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90775 fis, clone THYRO1001071, highly similar to
           ADP-ribosylation factor binding protein GGA1. ).
          Length = 639

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207


>AF233521-1|AAF35393.1|  639|Homo sapiens gamma-adaptin related
           protein, GGA1 protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207


>AF218584-1|AAF42847.1|  639|Homo sapiens GGA1 protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207


>AF190862-1|AAF05707.1|  639|Homo sapiens ADP-ribosylation factor
           binding protein GGA1 protein.
          Length = 639

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 468 LKSDTVVTMPPLVGPSSRLAAFDDDEKAELLADTLQTQCTPSTQSVDPVHVELVDSEVER 647
           L  DT   +PP   P  +   F+D+EK+++LA  L++      ++ + +  E+V  + +R
Sbjct: 151 LPDDTTFPLPP---PRPKNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKR 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,300,739
Number of Sequences: 237096
Number of extensions: 1932918
Number of successful extensions: 4687
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4682
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)