Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31351
(465 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 99 3e-22
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 98 5e-22
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 84 1e-17
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 77 1e-15
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 67 1e-12
SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase |Schizosacch... 51 8e-08
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 47 1e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.20
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.81
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 26 3.3
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 4.3
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 4.3
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 7.5
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 25 7.5
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 24 9.9
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 24 9.9
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 99.1 bits (236), Expect = 3e-22
Identities = 51/120 (42%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = +1
Query: 109 RVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADXVQTGFGRTGDHFWGFETH 288
+VAAF E IQG GV+ GYL++A +L K + L++AD VQTG RTG E
Sbjct: 206 KVAAFLVEPIQGEAGVMVPDDGYLEEAYKLCKAHNVLFIADEVQTGVARTGKMLC-IEHS 264
Query: 289 GVKPDIVTMAKGIGNG-FPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIE 465
VKPD+V + K I G +P++AV++++EI N + +T+GGNP+ + V A LEV++
Sbjct: 265 NVKPDVVILGKAISGGVYPVSAVLSSREIMLNFEPGTHGSTYGGNPLGAAVSIAALEVVK 324
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 98.3 bits (234), Expect = 5e-22
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Frame = +1
Query: 106 GRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADXVQTGFGRTGDHFWGFET 285
G +A E+I GG+++ P+GYLK ++ ++ G L + D QTG GRTG F FE
Sbjct: 210 GSLACMIVETILSTGGIIELPQGYLKALKKKCEERGMLLIIDEAQTGIGRTGSMF-SFEH 268
Query: 286 HGVKPDIVTMAKGIGNGFPLAAVVTTKEI--AANHAKAAYFNTFGGNPMASTVGKAVLEV 459
HG+ PDI+T++K +G G LAAV+T++EI ++ T +P+ + +G VL+V
Sbjct: 269 HGIVPDILTLSKSLGAGTALAAVITSEEIEKVCYDNGFVFYTTHASDPLPAAIGSTVLKV 328
Query: 460 IE 465
++
Sbjct: 329 VK 330
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 83.8 bits (198), Expect = 1e-17
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Frame = +1
Query: 79 ELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADXVQTGFGRT 258
E L ++ +G +F E IQG GGV+ P GYL KA+EL K V D +QTG GRT
Sbjct: 226 EALQVALSSGMYRSFIVEPIQGEGGVIVPPPGYLAKARELCTKYDTYLVLDEIQTGCGRT 285
Query: 259 GDHFWGFETHGVKPDIVTMAKGIGNG-FPLAAVVTTKEI---AANHAKAAYFN--TFGGN 420
G FW E + PD + AKG G P A + T+E+ A N + A+ + T+ N
Sbjct: 286 G-KFWACEYENIIPDCIAFAKGFSGGLIPFAGYIATEELWNAAYNSLETAFLHTATYQEN 344
Query: 421 PMASTVGKAVLEVI 462
+ G A ++ I
Sbjct: 345 TLGLAAGVATIDYI 358
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 77.4 bits (182), Expect = 1e-15
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Frame = +1
Query: 109 RVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADXVQTGFGRTGDHFWGFET- 285
+ AA E +QG GG+ +L ++ K G + D +Q G GR+GD W
Sbjct: 223 KTAAVIVEPVQGEGGICPAKPEFLIALRKACDKVGASLIYDEIQCGLGRSGD-LWAHSIV 281
Query: 286 -HGVKPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVG 441
PDI+T+AK + NG P+ A + + +IAA + +TFGGNP+A VG
Sbjct: 282 KDVASPDIITVAKPLANGLPIGATIVSSKIAAEIHPGEHGSTFGGNPVACRVG 334
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 66.9 bits (156), Expect = 1e-12
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Frame = +1
Query: 49 STDKYVHQL-NELLGNSVPAG--RVAAFFAESIQGA--GGVVQFPKGYLKKAQELIKKNG 213
+T++YV +L EL + G +VAAF AE++ GA G P GY K +++ K G
Sbjct: 192 TTEEYVARLAKELEDEILRVGPEKVAAFVAETVSGACTGCATPVP-GYFKAMRKVCDKYG 250
Query: 214 GLYVADXVQTGFGRTGD-HFWGFETHGVKPDIVTMAKGIGNGF-PLAAVVTTKEI----A 375
++ D V +G GRTG H W E GV PDI ++AK +G G+ P++ + I
Sbjct: 251 VIFYLDEVMSGIGRTGTMHAW--EQEGVTPDIQSIAKCLGGGYQPISGALVGHRIMNVFE 308
Query: 376 ANHAKAAYFNTFGGNPMASTVGKAVLEVI 462
A A F T+ +P+A + AV ++
Sbjct: 309 QKDAAMAGFFTYQAHPIACSAALAVQTIL 337
>SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 474
Score = 51.2 bits (117), Expect = 8e-08
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Frame = +1
Query: 112 VAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADXVQTGFGRTGDHFWGFETHG 291
V A E IQ GG + K Q +KK+ ++ D VQTG G TG W E
Sbjct: 263 VVACIIEPIQSEGGDNHASPDFFHKLQATLKKHDVKFIVDEVQTGVGSTGT-LWAHEQWN 321
Query: 292 V--KPDIVTMAKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIE 465
+ PD+VT +K AA + ++A +FNT+ G+P + + +L+ I+
Sbjct: 322 LPYPPDMVTFSKKF-----QAAGIFYHDLALRPHAYQHFNTWMGDPFRAVQSRYILQEIQ 376
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 47.2 bits (107), Expect = 1e-06
Identities = 29/94 (30%), Positives = 48/94 (51%)
Frame = +1
Query: 70 QLNELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVADXVQTGF 249
Q EL+ +S +AA E++QGAGG + K +++ Q +KN +++ D V T
Sbjct: 193 QFKELVNSSQD---IAAVIVEAMQGAGGAIPADKEFMQTIQLECEKNDIVFILDEVMTSR 249
Query: 250 GRTGDHFWGFETHGVKPDIVTMAKGIGNGFPLAA 351
G + + +KPD+ T+ K +G G P A
Sbjct: 250 LSPGGL---QQIYCLKPDLTTLGKYLGGGLPFGA 280
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.20
Identities = 29/87 (33%), Positives = 37/87 (42%)
Frame = -2
Query: 335 PLPIPLAIVTISGFTPCVSKPQK*SPVRPKPVCTSSATYKPPFFLINS*AFFRYPLGNCT 156
P+P P + T+S +P S P+ +PV P S T KPP +S N
Sbjct: 255 PIPPP-SNGTVS--SPPNSPPRPIAPVSMNPAINS--TSKPPLPPPSSRVSAAALAANKK 309
Query: 155 TPPAP*MDSAKNAATLPAGTELPNSSL 75
PP P S +N P G NSSL
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSL 336
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 27.9 bits (59), Expect = 0.81
Identities = 23/75 (30%), Positives = 30/75 (40%)
Frame = +1
Query: 7 SQAPGSCSCTGECISTDKYVHQLNELLGNSVPAGRVAAFFAESIQGAGGVVQFPKGYLKK 186
S PGSC + D++ QLN LL N V R++A G V L+K
Sbjct: 420 SNMPGSCLPGASSNTADEFTEQLN-LLKNEV--ARLSAICPSPNSGINASVLTNADNLEK 476
Query: 187 AQELIKKNGGLYVAD 231
L+ N V D
Sbjct: 477 ENLLLVNNNAFKVDD 491
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 3.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 124 FAESIQGAGGVVQFPKGYLKKAQELIKKNGGLYVA 228
F + A VVQF YLKK K+N GLY +
Sbjct: 396 FVGRVANATDVVQF---YLKKKYTRSKRNDGLYTS 427
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 4.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 371 ISLVVTTAARGNPLPIPLAIVTISGFTPCVSKPQK*SPVRPKPVCTS 231
+S T R P + A +SGF P VS P+K + ++ K TS
Sbjct: 16 VSSAPTVNERSYPFLLD-ASAGVSGFNPVVSSPEKKARMKYKKNSTS 61
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 4.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -1
Query: 222 IQATILLDQLLSFLQVSLRELHDSTSTLNGFRKE 121
IQ + +D+LL +++ LREL + + L + K+
Sbjct: 183 IQKSEKIDELLQYIEERLRELEEEKNDLAVYHKK 216
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 43 CISTDKYVHQLNELLGNSVP 102
C+STD+Y +L E GN P
Sbjct: 6 CLSTDEYEPELIEKYGNPEP 25
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 24.6 bits (51), Expect = 7.5
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +1
Query: 91 NSVPAGRVAAFFAE---SIQGAGGVVQFPKGYLKKA---QELIKKNGGLYVADXVQTGFG 252
N + +GR A A +I A ++ G + + +ELIK++GG Y Q G
Sbjct: 764 NRLASGRTAIVIAHRLSTITNADLILCISNGRIVETGTHEELIKRDGGAYKKMWFQQAMG 823
Query: 253 RT 258
+T
Sbjct: 824 KT 825
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 24.2 bits (50), Expect = 9.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 216 ATILLDQLLSFLQVSLRELHDSTSTLNGFRKECRYSAG 103
ATI L L +F QV+L E H S T F +C+ +G
Sbjct: 293 ATIRLWNLATFQQVALLEGHSSGVTCLQF-DQCKLISG 329
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 24.2 bits (50), Expect = 9.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 307 VTMAKGIGNGFPLAAVVTTKEIAANHAKAAY 399
+T + G+ N +PL+ TKE AN + Y
Sbjct: 949 MTPSNGLRNIYPLSETFLTKEAIANGLENLY 979
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,862,915
Number of Sequences: 5004
Number of extensions: 35709
Number of successful extensions: 119
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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