Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31347
         (398 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024881-8|AAK71411.2|  318|Caenorhabditis elegans Serpentine re...    31   0.30 
Z81575-5|CAB04631.2|  353|Caenorhabditis elegans Hypothetical pr...    31   0.40 
Z78537-1|CAB01719.1|  182|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine rece...    30   0.70 
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    28   2.1  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    28   2.1  
U88176-4|ABB51191.1|  427|Caenorhabditis elegans Hypothetical pr...    27   3.7  
U56966-8|AAA98721.3|  252|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AF047657-1|AAK18951.1|  328|Caenorhabditis elegans Serpentine re...    27   3.7  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    27   5.0  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      27   5.0  
Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U21317-9|AAA62530.3|  355|Caenorhabditis elegans Serpentine rece...    27   6.5  
Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U39655-1|AAA80408.1|  395|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AL021566-3|CAA16499.1|  353|Caenorhabditis elegans Hypothetical ...    26   8.7  
AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine re...    26   8.7  

>AC024881-8|AAK71411.2|  318|Caenorhabditis elegans Serpentine
           receptor, class t protein53 protein.
          Length = 318

 Score = 31.1 bits (67), Expect = 0.30
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 99  VICKYFIYLFIYIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYLILLRTARA 275
           +  + F+   I++ A I  +V+ F  + +FLT+   ++  +      IIYLI  R  RA
Sbjct: 238 IFLQAFLLCLIHLSASILYVVMQFIEVPKFLTIISQYLWQLAQGCPVIIYLIFNRKVRA 296


>Z81575-5|CAB04631.2|  353|Caenorhabditis elegans Hypothetical
           protein R08H2.5 protein.
          Length = 353

 Score = 30.7 bits (66), Expect = 0.40
 Identities = 17/69 (24%), Positives = 37/69 (53%)
 Frame = +3

Query: 87  VVLCVICKYFIYLFIYIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYLILLRT 266
           VVLC +C  +I+L +   +C+   +L++  +   L LS   +  ++ + A + Y+ L  +
Sbjct: 78  VVLCTLCPLYIFLPMSAVSCVG--LLSWLGVPTLLQLS---IIIVVEICAALSYIYLFES 132

Query: 267 ARARXHTHK 293
             +  HT++
Sbjct: 133 RASSLHTNR 141


>Z78537-1|CAB01719.1|  182|Caenorhabditis elegans Hypothetical
           protein C09F12.1 protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 72  GSLTCVVLCVICKYFIYLFIYIYACIHSIVLNFYR-LYRFLTLSRAFVATILNLTADIIY 248
           G + CVV+C+I    + +F  +Y  +  +     + +   LTL  A ++TIL L A I+Y
Sbjct: 75  GWMKCVVVCMILSLIVQIFAVVYNFLTCLACCCKKYIIHPLTLF-AVISTILLLIAVIVY 133


>U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein18 protein.
          Length = 337

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 20/81 (24%), Positives = 39/81 (48%)
 Frame = +3

Query: 78  LTCVVLCVICKYFIYLFIYIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYLIL 257
           LT +   V+ + F++ F +  + +  + +NF+ +   L +   F   + + T  IIYL L
Sbjct: 251 LTKMQATVLLQAFLFCFFHATSSVVYVYMNFFEISELLIVIGHFFWQLSSGTVCIIYLTL 310

Query: 258 LRTARARXHTHKTIRALQNTI 320
            ++ R     +   R  QN+I
Sbjct: 311 NKSIRQEVR-NLICRNQQNSI 330


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 341 HCNFGVSNGIL*CAYSFMRVLPCACSTQQY 252
           +CNF  SN    C +SF+ V+ CA  + QY
Sbjct: 172 NCNFVPSNHQNQCQFSFVLVISCADQSIQY 201


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 341 HCNFGVSNGIL*CAYSFMRVLPCACSTQQY 252
           +CNF  SN    C +SF+ V+ CA  + QY
Sbjct: 136 NCNFVPSNHQNQCQFSFVLVISCADQSIQY 165


>U88176-4|ABB51191.1|  427|Caenorhabditis elegans Hypothetical
           protein F18F11.3 protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +3

Query: 51  RRGTCGKGSLTCVVLCVICKYFIYLFIYI--YACIHSIVLNFYRL-YRFLTLSRAFV 212
           +RG C   +L+C  L     +FI+L +++     IH+ V+N+  L ++ L     F+
Sbjct: 37  KRGYCFSVALSCTSLNSSILFFIFLLLWVNHNKVIHTQVINWMPLKFKILIFDNIFL 93


>U56966-8|AAA98721.3|  252|Caenorhabditis elegans Hypothetical
           protein C42D8.1 protein.
          Length = 252

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 93  LCVICKYFIYLF-IYIYACIHSIVLNFYRLYRFLTLSRAFVATIL 224
           L + C   I LF +  + CI SI++   ++Y  L +   F+A IL
Sbjct: 116 LSMFCGVIILLFALNAHRCIPSIIIALEKVYAILGIVFMFIAGIL 160


>AF047657-1|AAK18951.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein54 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +3

Query: 78  LTCVVLCVICKYFIYL--FIYIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYL 251
           L+  +  V   Y + L  FIY Y  IH+  L  ++ + +LT+S    A I  L     Y+
Sbjct: 92  LSSRISLVAASYAVLLTHFIYRYLVIHNSSLATHKFHWYLTIS----AIIFVLYFVAWYV 147

Query: 252 ILLRTARARXHTHKTIRALQNTITDTE 332
           I    ARA     + IR   + +  T+
Sbjct: 148 ICYFPARANVEIREYIRKEYSEVYGTD 174


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 290 MRVLPCACSTQQY*IYNVSSQIQYRR 213
           ++V+PC  +  Q     VS+Q+QYRR
Sbjct: 3   LKVIPCTLTKNQEVFKCVSAQLQYRR 28


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 290 MRVLPCACSTQQY*IYNVSSQIQYRR 213
           ++V+PC  +  Q     VS+Q+QYRR
Sbjct: 3   LKVIPCTLTKNQEVFKCVSAQLQYRR 28


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 290 MRVLPCACSTQQY*IYNVSSQIQYRR 213
           ++V+PC  +  Q     VS+Q+QYRR
Sbjct: 3   LKVIPCTLTKNQEVFKCVSAQLQYRR 28


>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 99  VICKYFIYLFI-YIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYLILLRTARA 275
           +I K F+ LF+ Y+ +  +    N   L  +  +   F+  +L L   +IY+ ++   R 
Sbjct: 151 LISKDFLLLFLCYLNSIQYFSENNLQSLLSYYMILLLFLNIVLPLLTPLIYIPVMIVTRK 210

Query: 276 RXHTH 290
             H H
Sbjct: 211 NSHQH 215


>U21317-9|AAA62530.3|  355|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 1 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 132 YIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYLILLRTARARXHT 287
           +  AC  S ++  Y L  F  +  AF+   ++  + + YL+L    + R HT
Sbjct: 152 FTVACGVSAIVMLYDLLPFAVM--AFLGVFISCASFLFYLVLFYMNKRRLHT 201


>Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical
           protein F49H6.11 protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 118 FIYLYIYTHAYIRSFLIFIVYTDF 189
           F+Y   Y   Y+R+F +F V  DF
Sbjct: 140 FLYSQNYISKYVRNFNVFFVLKDF 163


>U39655-1|AAA80408.1|  395|Caenorhabditis elegans Hypothetical
           protein C46F4.1 protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +3

Query: 111 YFIYLFI--YIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYLI 254
           YF+YL +  Y Y C+  +    +  YRF  ++   V   +  T  I+  +
Sbjct: 85  YFLYLLLEYYRYQCVQLLWSEAFTRYRFFNVNLNTVFHTIAFTTTIVVAV 134


>AL021566-3|CAA16499.1|  353|Caenorhabditis elegans Hypothetical
           protein F08E10.3 protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +3

Query: 87  VVLCVICKYFIYLFIYIYACIHSIVLNFYRLYRFLTLSRAFVATI 221
           VVLC +C  +++L +   +CI   +L+++ L   L LS   +A I
Sbjct: 78  VVLCTLCPLYLFLPMTAVSCIG--LLSWFGLPTLLQLSIICLAEI 120


>AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein9 protein.
          Length = 293

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
 Frame = +3

Query: 78  LTCVVLCVICKYFIYLFIYIYACIHSIVLNFYRLYRFLTLSRAFVATILNLTADIIYLIL 257
           L C  +     Y+      I  C+   VL+     +  T+ + F+  I N+   ++Y+IL
Sbjct: 130 LMCSTVVTAYSYYSVNEEVINTCVPMFVLS----NQASTVYKLFIIFI-NIIVTVVYVIL 184

Query: 258 LRTARARXHTH-----KTIRALQNTIT 323
           +RT   +  T      KTI+ LQ +++
Sbjct: 185 IRTFHLKKQTGNLTSLKTIKGLQFSVS 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,485,936
Number of Sequences: 27780
Number of extensions: 139249
Number of successful extensions: 406
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)