Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31339
(319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1538 + 34239913-34241274,34241468-34241578 30 0.45
02_04_0240 - 21194597-21194743,21195579-21195680,21195797-211958... 30 0.45
11_02_0096 - 8261667-8262083 29 0.79
02_02_0115 + 6946945-6947087,6947511-6947748 29 1.0
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 27 2.4
04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781 27 2.4
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 27 2.4
02_01_0712 + 5329016-5329744,5330477-5330521 27 2.4
01_05_0289 + 20482472-20482603,20483175-20483345,20483501-204835... 27 2.4
11_06_0702 + 26432798-26432890,26434021-26434416 27 3.2
11_06_0051 - 19645726-19646007,19646045-19646513,19647749-196477... 27 3.2
04_04_0811 - 28246801-28247049,28247161-28247384,28248236-282484... 27 3.2
02_04_0335 + 22117902-22119869 27 3.2
01_05_0683 + 24260627-24260759,24262408-24262610 27 3.2
03_05_0266 + 22537578-22538081 27 4.2
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 26 5.6
11_06_0470 + 23977394-23977503,23977755-23977922,23978724-239793... 26 5.6
09_02_0310 - 7162798-7163187 24 5.7
12_02_1125 - 26327433-26328239 26 7.4
11_05_0103 - 19083663-19083856,19083962-19084169,19084239-190843... 26 7.4
10_08_0325 - 16752288-16752712,16755256-16757653 26 7.4
08_01_0226 + 1826395-1826772 26 7.4
07_01_0997 + 8398341-8398533,8399215-8399231 26 7.4
02_02_0317 + 8893593-8894207 26 7.4
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 26 7.4
12_02_0867 - 23828084-23828845,23828931-23829067,23829148-238293... 25 9.7
11_01_0355 + 2679561-2680985,2681183-2682295 25 9.7
10_07_0072 + 12607920-12608229,12609205-12609420,12610216-126103... 25 9.7
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 25 9.7
08_01_0106 - 762287-763393,763752-764414 25 9.7
03_05_0462 - 24564170-24565447 25 9.7
02_05_0645 - 30596133-30596627,30596707-30596784 25 9.7
01_01_0756 - 5836872-5838614 25 9.7
>04_04_1538 + 34239913-34241274,34241468-34241578
Length = 490
Score = 29.9 bits (64), Expect = 0.45
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 96 SLKTPAAHNRRPTSDRAGAQSGLLKRRDRVD----AXHITSIPPSHGRRTGGRQRHD 254
+LK AHN R +R G + G+ + D + A ++ + P GRR G RHD
Sbjct: 95 NLKFVDAHNAR-ADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHD 150
>02_04_0240 -
21194597-21194743,21195579-21195680,21195797-21195875,
21195921-21196043,21196135-21196193,21196453-21196974,
21197434-21198177,21198426-21198506
Length = 618
Score = 29.9 bits (64), Expect = 0.45
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 162 LLKRRDRVDAXHITSIPPSHGRRTGGRQRHDHRFPRSAGREPALMAPRYTF 314
LLK ++ V+ TS + G H+H+ P + +P AP +F
Sbjct: 93 LLKAQEEVNQTEATSEEGTDHYDANGHNIHEHKLPAVSSEDPVASAPSSSF 143
>11_02_0096 - 8261667-8262083
Length = 138
Score = 29.1 bits (62), Expect = 0.79
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 123 RRPTSDRAGAQSGLLKRRDRVDAXHITSIPPSHGRRTGG 239
RRP +GA SG +RR+ D T + P GR GG
Sbjct: 23 RRPRPVESGASSGATRRRESSD----TGLGPRRGRPPGG 57
>02_02_0115 + 6946945-6947087,6947511-6947748
Length = 126
Score = 28.7 bits (61), Expect = 1.0
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -1
Query: 292 KAGSRPAERGNRWSCRWRPPVRRPWDGGMDVMCXASTLSRRFNSPDWAP 146
+ G RG RW +WRPP R WD AS S R +SP P
Sbjct: 26 QGGGGGHSRGWRW--QWRPPPARRWD------IVASVSSTRQSSPMCGP 66
>11_06_0152 + 20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 27.5 bits (58), Expect = 2.4
Identities = 26/65 (40%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = -3
Query: 299 RHQSGLSAR*TREPVVVSLAAXGPASV-----GRWDGCNVLCVNPVPPFQ*PRL--GSGP 141
R SGL AR +V SL G GR G V V VPP Q P G G
Sbjct: 827 RSGSGLEARVDAARLVESLLRDGGEDDEVRRDGRRGGGGVRAVGGVPPVQGPARGGGGGG 886
Query: 140 VRGRA 126
V+GRA
Sbjct: 887 VQGRA 891
>04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781
Length = 551
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 271 ERGNRWSCRWRPPVRR 224
E G+RWS RWR RR
Sbjct: 317 EEGHRWSLRWRVDFRR 332
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 36 QGENRRIPTRAAGGVCGS*TSLKTPAAHNRRPTS-DRAGAQSGLLKRRDRVDAXHITSIP 212
+GE+ P+ AGG G A + P S DRA S LKR ++A
Sbjct: 58 RGESNYGPSDPAGGGGGGGGEAAAMATSKKDPPSRDRAARMSPNLKRSSGIEASSAAGYG 117
Query: 213 PSHGR 227
P R
Sbjct: 118 PRRAR 122
>02_01_0712 + 5329016-5329744,5330477-5330521
Length = 257
Score = 27.5 bits (58), Expect = 2.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 256 WSCRWRPPVRRPWDGG 209
WS R PP+ PW+GG
Sbjct: 87 WSSRLPPPLDLPWEGG 102
>01_05_0289 +
20482472-20482603,20483175-20483345,20483501-20483530,
20483640-20483847,20483952-20484033,20484128-20484236,
20484329-20484745
Length = 382
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 198 CAXRQPCPAVSIAPTGLRPGPR*GAGCERQ 109
C+ +PC VS+A L P GAG RQ
Sbjct: 313 CSDARPCTGVSMADVRLSPASATGAGGLRQ 342
>11_06_0702 + 26432798-26432890,26434021-26434416
Length = 162
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 292 KAGSRPAERGNRWSCRWRPPVRR--PWDGG 209
KA +RPA +R RWR P RR DGG
Sbjct: 43 KATARPAGARSRRERRWRRPARRKEKGDGG 72
>11_06_0051 -
19645726-19646007,19646045-19646513,19647749-19647771,
19647978-19648328
Length = 374
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 298 AIKAGSRPAERGNRWSCRWRPPVRRPWD 215
A++ SRP ++ + + RP +PWD
Sbjct: 40 AVECSSRPQKKATKHHMKTRPKKSQPWD 67
>04_04_0811 -
28246801-28247049,28247161-28247384,28248236-28248435,
28248612-28248888,28249035-28249104
Length = 339
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +2
Query: 65 RGRWGMW---ELNLTKNSCRSQPAPYLGP 142
R RW W E LT SCR PAP P
Sbjct: 40 RRRWERWVEREFVLTPASCREVPAPVAPP 68
>02_04_0335 + 22117902-22119869
Length = 655
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 92 NLTKNSCRSQPAPYLGPGRSPVGAIETAGQ 181
N K+SC S P P +G GR G + G+
Sbjct: 604 NSMKSSCSSAPPPSMGRGREGGGFVVPEGR 633
>01_05_0683 + 24260627-24260759,24262408-24262610
Length = 111
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 190 ASTLSRRFNSPDWAPARSEVGRRL*AAGVFSEVQ 89
AS ++RR N DW P + RRL A + S VQ
Sbjct: 62 ASFVTRRLNDWDWGPVSNGGNRRL-ATRIESSVQ 94
>03_05_0266 + 22537578-22538081
Length = 167
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 77 GMWELNLTKNSCRSQPAPYLGPGRSPVGAIETAGQG*R 190
G W+ T PAP + P +P G + G G R
Sbjct: 14 GSWQPAATSTPATVSPAPAVSPVAAPAGELGGGGAGAR 51
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 280 RPAERGNRWSCRWRPPVRRPWDGG 209
+P + NRW RWR R+P++ G
Sbjct: 4 KPIKPSNRWDSRWR---RKPFERG 24
>11_06_0470 +
23977394-23977503,23977755-23977922,23978724-23979367,
23979584-23979823,23980175-23980296,23980397-23981080
Length = 655
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 207 IPPSHGRRTGGRQRHDHRFPRSAGREPALMA 299
+PP H +R+ H+HR S G L +
Sbjct: 101 VPPKHRKRSSLVNEHNHRLVESCGENMHLFS 131
>09_02_0310 - 7162798-7163187
Length = 129
Score = 23.8 bits (49), Expect(2) = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 298 AIKAGSRPAERGNRWSCRWRPP 233
A K R +RG RW RWR P
Sbjct: 10 APKTSHRGCDRGQRW--RWRLP 29
Score = 21.0 bits (42), Expect(2) = 5.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 259 RWSCRWRPPVRRPWDGGM 206
RW R R P PW G M
Sbjct: 64 RWQRRRRLPSLLPWIGPM 81
>12_02_1125 - 26327433-26328239
Length = 268
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 292 KAGSRPAERGNRWSCRWRPP-VRRPWDGGMDVMCXASTLS 176
+AG R + R C RP RRP DGG +C + + S
Sbjct: 134 QAGCRRSAFLGRVGCAARPDGARRPGDGGAGGLCRSRSSS 173
>11_05_0103 -
19083663-19083856,19083962-19084169,19084239-19084323,
19084591-19084865
Length = 253
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = -1
Query: 304 RGAIKAG---SRPAERGN-RWSCRWRPPVRRPWDGGM 206
RG I G RP +G W WR + + W+GG+
Sbjct: 174 RGQITKGHMVERPDNKGQFPWVTWWRGQITKVWNGGL 210
>10_08_0325 - 16752288-16752712,16755256-16757653
Length = 940
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 80 MWELNLTKNSCRSQPAPYLGPGRS 151
MW LNL+ N+ + P LG RS
Sbjct: 484 MWYLNLSSNNLSGEVPPLLGKMRS 507
>08_01_0226 + 1826395-1826772
Length = 125
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 183 VDAXHITSIPPSHGRRTGG 239
+D H + +PPS G TGG
Sbjct: 67 LDCLHASLVPPSEGAATGG 85
>07_01_0997 + 8398341-8398533,8399215-8399231
Length = 69
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 80 MWELNLTKNSCRSQPAPYLGPGRS 151
MW LNL+ N+ + P LG RS
Sbjct: 7 MWYLNLSSNNLSGEVTPLLGKIRS 30
>02_02_0317 + 8893593-8894207
Length = 204
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 286 GSRPAERGNRWSCRWRP 236
G E G+RW RWRP
Sbjct: 106 GEAGEESGSRWGRRWRP 122
>01_05_0265 +
20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 204 SIPPSHGRRTGGRQRHDHRFP 266
S PP GRR GGR+R P
Sbjct: 35 SSPPQSGRRGGGRRRRGSASP 55
>12_02_0867 -
23828084-23828845,23828931-23829067,23829148-23829354,
23830226-23831027
Length = 635
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 161 PRLGSGPVRGRAPVVSGRS 105
P LGSGP RGR + S RS
Sbjct: 128 PGLGSGPGRGRGALRSRRS 146
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 95 GSTPTYPTCRAGGDPAIFSLW 33
GS Y CRA G P + ++W
Sbjct: 379 GSYQVYMKCRAAGQPPLEAVW 399
>10_07_0072 +
12607920-12608229,12609205-12609420,12610216-12610367,
12611554-12611833,12612037-12612239
Length = 386
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 146 GPVRGRAPVVSGRSF**GSTPTYPTCRAGGDPAIFS 39
GPV A V S + + GS+P C +GG+P F+
Sbjct: 307 GPVA--AAVASPKEYGFGSSPLAACCGSGGEPYNFN 340
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 210 PPSHGRRTGGRQRHDHRFPR 269
PP+ GRR GR++ D PR
Sbjct: 209 PPARGRRRRGRRQRDPAQPR 228
>08_01_0106 - 762287-763393,763752-764414
Length = 589
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 222 GRRTGGRQRHDHRFPRSA---GREPALMAPRY 308
GR+ RH H FP+ A GR+ +++ R+
Sbjct: 76 GRKAKAATRHSHSFPKLACPGGRDGTIISTRF 107
>03_05_0462 - 24564170-24565447
Length = 425
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Frame = -1
Query: 265 GNRWSCRWRPPVRRPWDGG-------MDVMCXASTLSRRFNSP--DWAPARSEVGRRL 119
G WS R VRRP D G +DV+ + L+ R P D PA EV RL
Sbjct: 298 GELWSVLDRELVRRPDDDGDGDDKAAVDVVRELAELAARCLGPSGDERPAMKEVAERL 355
>02_05_0645 - 30596133-30596627,30596707-30596784
Length = 190
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 289 AGSRPAERGNRWSCRWRPPVRRPWDG 212
A + E G RW RWR RR W G
Sbjct: 75 AAAEEEEDGRRWRRRWR---RRRWRG 97
>01_01_0756 - 5836872-5838614
Length = 580
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 196 CXASTLSRRFNSPDWAPARSEVGRRL*AAGVFSEVQLPHTPPAARVG 56
C AS RF++ D A + + A F EV+ P PP G
Sbjct: 25 CAASPRDLRFSAADIAAVEAVLPSLRRARNTFFEVERPLRPPRGSSG 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,593,808
Number of Sequences: 37544
Number of extensions: 252285
Number of successful extensions: 807
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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