Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31339
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   0.89 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   1.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   2.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   3.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   3.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   4.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.7  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    20   8.3  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 244  WRPPVRRPWDG 212
            W+PP R  W+G
Sbjct: 997  WKPPPREDWNG 1007


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 89  LNLTKNSCRSQPAPYLGP 142
           LNL+K S    P P +GP
Sbjct: 875 LNLSKKSPSPSPRPLVGP 892


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 221 VGRWDGCNVLC 189
           V +W GC V+C
Sbjct: 282 VCKWPGCEVIC 292


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 301 GAIKAGSRPAERGNRWS 251
           G + AG    ++GN WS
Sbjct: 752 GVVNAGGWLGQQGNSWS 768


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 122 PAPYLGPGRSPVGAIETA 175
           P+P  GPG  P   I+ A
Sbjct: 396 PSPPRGPGGVPTSVIQAA 413


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +2

Query: 71  RWGMWELNLTKNSCRSQPAPYLGPGRSP 154
           RW  ++  +    C + PA Y    R P
Sbjct: 394 RWFTYQETVDPAGCNAGPAKYYLKSRDP 421


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 61  PARQVGYVGVEPH 99
           P R+   VGV+PH
Sbjct: 490 PPREAPLVGVQPH 502


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = +2

Query: 56  PHPRGRWGMWELNLTKNSCRSQPAPY 133
           P P G W   +  + +  C   P P+
Sbjct: 132 PRPMGPWISVQEQVPRFRCIGPPTPF 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,033
Number of Sequences: 438
Number of extensions: 2204
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)