Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31331
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.52
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 0.91
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.2
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 30 1.2
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 30 1.2
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 29 1.6
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 29 2.8
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 28 3.7
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 3.7
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 28 3.7
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 6.4
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.5
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 469 RVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 335
+++D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 0.91
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
TTS+ P +S ST S +++ + + K P P + S P +P + T L
Sbjct: 1378 TTSLAPLSSSLPSTVPSSTQSFSSTSEGSSKASSSPVPSQTSS--TPTNPTGSTESSTLL 1435
Query: 351 TLTQTASGPET--SPASDNLSVPSSDTWDKT*ILSINSSLTLVN-SDTLSDQP 500
+ T + S T S AS + PS+++ + + +SS + V+ S S QP
Sbjct: 1436 SSTISGSTQHTTMSKASSGSTSPSTNSQTGSTVTMGSSSTSGVSTSSASSTQP 1488
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 315 SPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
S V +P T+LT T TAS T P++ ++ S + + + S +SS T V + T ++
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTE 479
Query: 495 QPWVVP 512
P
Sbjct: 480 STSTSP 485
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 315 SPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
S V +P T+LT T TAS T P++ ++ S + + + S +SS T V + T ++
Sbjct: 421 STVTTTEPTTTLT-TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTE 479
Query: 495 QPWVVP 512
P
Sbjct: 480 STSTSP 485
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 439 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 284
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 439 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 284
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PKPPEL-SPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 425
P PP + SP LP +P +P+T P +SPA + P++ T
Sbjct: 503 PAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLVQKPTTPT 553
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPL-T 344
GT +PT A + T + P +T P P +P PV+ P T
Sbjct: 513 GTIGTSPT-APANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTST 571
Query: 345 SLTLTQTASGPETSPASDNLSVPSSDT 425
+ T T T + +T+P + ++ PS+ T
Sbjct: 572 TTTTTTTTTTTQTTPTTPVVTTPSTIT 598
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 523 SSTSGTTQGWSDRVSELTRVSDELIDKIQ 437
S+T T+QG RV +LT DE++++I+
Sbjct: 638 SATPATSQGVLSRVHQLTSQGDEVVERIR 666
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 285 PELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 413
P++ P LPV + + S+ + + E P SD+ SVP
Sbjct: 344 PKMPPFVLPVETSVGCDNMNSVAIVHSEIDTEFRPMSDSQSVP 386
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 425
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 669 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 719
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 425
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 725 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 775
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 402 DCLKPAKFPDLTPSV*ELMTLAAAQASPG 316
D +KPA DL PSV + M L A SPG
Sbjct: 286 DKMKPAVLDDLVPSV-DFMGLVKAMISPG 313
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDTWDKT-*ILS 449
P P SP+ LP V P LT+ +S P + S + T KT +LS
Sbjct: 2240 PSPTNQSPVTLPPPSVATAGPTGPILTVVPVSSAPTSGAVSSTATAAPVITTTKTSSVLS 2299
Query: 450 INSSLTLV 473
++ S+ +V
Sbjct: 2300 VSFSMFIV 2307
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 294 SPIYLPVSPVMPVQPLTSLTLTQTAS----GPETSPASDNLSVPSSDT 425
S IYLP V+P +S+ L+ T S P+T PAS +++ ++ T
Sbjct: 502 SSIYLPQPAYPEVKPNSSVILSSTQSQNNTSPQTIPASASVTNSATST 549
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 ELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLS--VPSSDTWDKT*ILSINSS 461
++SP+ P+ P +P +PL + + + P+ +P +++ +P T+ + + S
Sbjct: 1513 KVSPVKRPIPPSIPNEPLDIIPPVPSDNIPDPTPPTNSFGTVLPVPHTFQTSVRVPTQSL 1572
Query: 462 LTLVNSDTLSDQP 500
+ ++ T+ QP
Sbjct: 1573 FSSSSTTTVQPQP 1585
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 330 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 428
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 330 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTW 428
V P+T+ T SGP S N + SSD W
Sbjct: 846 VTPVTTTTTNMRESGPLLHENSHNQLLSSSDNW 878
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,574,502
Number of Sequences: 27780
Number of extensions: 271245
Number of successful extensions: 1098
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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