Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31328
(378 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 3.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 3.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 3.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 3.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 4.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 4.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 4.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 8.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 8.4
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 20 8.4
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 24 SSLTGELISISSLICPMSNSW 86
+SL LI ++ CP+ SW
Sbjct: 232 TSLNAYLIKNQTITCPIKVSW 252
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 24 SSLTGELISISSLICPMSNSW 86
+SL LI ++ CP+ SW
Sbjct: 232 TSLNAYLIKNQTITCPIKVSW 252
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 24 SSLTGELISISSLICPMSNSW 86
+SL LI ++ CP+ SW
Sbjct: 283 TSLNAYLIKNQTITCPIKVSW 303
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 3.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 24 SSLTGELISISSLICPMSNSW 86
+SL LI ++ CP+ SW
Sbjct: 232 TSLNAYLIKNQTITCPIKVSW 252
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 4.8
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +1
Query: 142 NGIGQEAASRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF 288
N E R+ R +S+ +RDR++ + +H+ N + N+
Sbjct: 48 NSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 4.8
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +1
Query: 142 NGIGQEAASRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF 288
N E R+ R +S+ +RDR++ + +H+ N + N+
Sbjct: 48 NSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 4.8
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +1
Query: 142 NGIGQEAASRQERGSSE*EARDREDSLEKHDHRSRDGRFNCRHLQRKNF 288
N E R+ R +S+ +RDR++ + +H+ N + N+
Sbjct: 48 NSYKNEREYRKYRETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNY 96
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 8.4
Identities = 10/45 (22%), Positives = 24/45 (53%)
Frame = +2
Query: 158 KLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFN 292
++ R ++ +P + ++ + HL+ IV ++ G+ +TFN
Sbjct: 223 EITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFN 267
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.2 bits (40), Expect = 8.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 157 EAASRQERGSSE*EARDREDSLEKHDHR 240
E + R+ R +S+ +RDR + +HR
Sbjct: 286 ENSYRKYRETSKERSRDRRERGRSREHR 313
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 20.2 bits (40), Expect = 8.4
Identities = 4/8 (50%), Positives = 7/8 (87%)
Frame = +3
Query: 129 LNVNQWHW 152
+N++ WHW
Sbjct: 205 INLHHWHW 212
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 202 RDREDSLEKHDHRSRDGRFNCRHL 273
+DR L + H+ R+NC L
Sbjct: 227 KDRRGELFYYMHQQIMARYNCERL 250
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,541
Number of Sequences: 438
Number of extensions: 1673
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9176370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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