Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31325
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   5.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 144 RHRFHQNHXRALQRGRPPEHHQ 209
           RH   QNH   LQ     +HH+
Sbjct: 140 RHHHLQNHHHHLQSTAVQDHHR 161


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 9/23 (39%)
 Frame = +3

Query: 147 HRFHQNHXRALQRGRPPEHHQCQ 215
           H  H NH      G P  HH  Q
Sbjct: 335 HHQHGNHTMGPTMGPPHHHHHHQ 357


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 331 GPNLIPLSRVTPAFL 287
           G NL+P++R  PA+L
Sbjct: 148 GLNLLPMNRNRPAYL 162


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 227 DLLHSRHQNLW 259
           D+LH RH  +W
Sbjct: 218 DILHLRHTKIW 228


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 243 GIKIFGQRILWASKSKNAGV 302
           G+K+F + +L A  S NAG+
Sbjct: 394 GMKVFDELLLDADWSVNAGM 413


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 240 EWSKS*RDXGTGGAREGD 187
           +W K  +  GT G+ +GD
Sbjct: 324 KWKKENKSKGTPGSGDGD 341


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 157 TKTTXXLSKGVALPSTTSAXISSRLTPFPASKSLASA 267
           T+T   ++ G   P  T + +    +PFP   +LASA
Sbjct: 628 TRTVCGVAAGD--PPLTISWLKDGQSPFPLPPNLASA 662


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,003
Number of Sequences: 438
Number of extensions: 3538
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)