Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31319
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB...    38   0.013
AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p pro...    38   0.017
AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA...    38   0.017

>AE014297-4509|AAN14206.1|  104|Drosophila melanogaster CG7920-PB,
           isoform B protein.
          Length = 104

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 22/61 (36%), Positives = 36/61 (59%)
 Frame = +3

Query: 93  ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 272
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61

Query: 273 K 275
           +
Sbjct: 62  E 62


>AY069288-1|AAL39433.1|  477|Drosophila melanogaster GM14349p
           protein.
          Length = 477

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +3

Query: 93  ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 272
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61


>AE014297-4508|AAF56990.1|  477|Drosophila melanogaster CG7920-PA,
           isoform A protein.
          Length = 477

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +3

Query: 93  ITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSG 272
           + + V Q++SL   K ++   SV +  +YFTY + LS P+ R+P     +EA   C+KSG
Sbjct: 5   LARHVGQLNSLL--KTAATASSVSAHNNYFTYVRELSHPIAREPPIVKPEEAV-ACVKSG 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,496,734
Number of Sequences: 53049
Number of extensions: 438814
Number of successful extensions: 920
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)