Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31319
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61953-5|AAC48080.2|  297|Caenorhabditis elegans Hypothetical pr...    31   0.77 
U23178-5|AAN63417.1|  439|Caenorhabditis elegans Vh1 dual-specif...    28   7.2  
U23178-4|AAK68300.1|  606|Caenorhabditis elegans Vh1 dual-specif...    28   7.2  
U23178-3|AAK68299.1|  657|Caenorhabditis elegans Vh1 dual-specif...    28   7.2  
AY585194-1|AAS91377.1|  657|Caenorhabditis elegans VH1-like phos...    28   7.2  
AF039045-9|AAB94200.1|  315|Caenorhabditis elegans Hypothetical ...    27   9.5  

>U61953-5|AAC48080.2|  297|Caenorhabditis elegans Hypothetical
           protein R08C7.4 protein.
          Length = 297

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +1

Query: 202 RSPWTGSLNIRPQRRRLRNVLNPVSFAKNILLKNN*VP 315
           R  +TG LN+R   RRL   +  VSF  N +LK   VP
Sbjct: 163 RLVYTGPLNLRSYLRRLPPNIGEVSFTTNRVLKTEPVP 200


>U23178-5|AAN63417.1|  439|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform c
           protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 159 VKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGKFCQKH 290
           +K D+++     + S      P +  A E  EKC ++GK C  H
Sbjct: 63  IKEDKNFMRIPVNDSYQEKLSPYFPMAYEFLEKCRRAGKKCLIH 106


>U23178-4|AAK68300.1|  606|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform b
           protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 159 VKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGKFCQKH 290
           +K D+++     + S      P +  A E  EKC ++GK C  H
Sbjct: 167 IKEDKNFMRIPVNDSYQEKLSPYFPMAYEFLEKCRRAGKKCLIH 210


>U23178-3|AAK68299.1|  657|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform a
           protein.
          Length = 657

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 159 VKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGKFCQKH 290
           +K D+++     + S      P +  A E  EKC ++GK C  H
Sbjct: 218 IKEDKNFMRIPVNDSYQEKLSPYFPMAYEFLEKCRRAGKKCLIH 261


>AY585194-1|AAS91377.1|  657|Caenorhabditis elegans VH1-like
           phosphatase 1 protein.
          Length = 657

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 159 VKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGKFCQKH 290
           +K D+++     + S      P +  A E  EKC ++GK C  H
Sbjct: 218 IKEDKNFMRIPVNDSYQEKLSPYFPMAYEFLEKCRRAGKKCLIH 261


>AF039045-9|AAB94200.1|  315|Caenorhabditis elegans Hypothetical
           protein F15E11.3 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +1

Query: 73  NLTGCL*LRKLFLKSRVFISGXXXXXXXXXNRIEVTLRIHNRCRSPWTGSLNIR 234
           +L G L +++  LKS  F++G         NR+  T+  +   +  W G+ N++
Sbjct: 15  HLIGSLLVKETLLKSSKFLAGLKSIECGGLNRVRKTIADNLVPQVEWIGNANLQ 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,236,231
Number of Sequences: 27780
Number of extensions: 247185
Number of successful extensions: 553
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)