Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31308
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.49 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.49 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          25   0.49 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                25   0.49 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.0  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.0  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   7.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -3

Query: 240 NTGITKLLVFKIYRIYIGKTHRFRYNVVFFQTENMRLP 127
           +T +   + F IY+  +   H+++ N+  + TE +  P
Sbjct: 409 STSLRDPVFFSIYKTILDYYHKYKENLPKYTTEELNFP 446


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -3

Query: 240 NTGITKLLVFKIYRIYIGKTHRFRYNVVFFQTENMRLP 127
           +T +   + F IY+  +   H+++ N+  + TE +  P
Sbjct: 409 STSLRDPVFFSIYKTILDYYHKYKENLPKYTTEELNFP 446


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -3

Query: 240 NTGITKLLVFKIYRIYIGKTHRFRYNVVFFQTENMRLP 127
           +T +   + F IY+  +   H+++ N+  + TE +  P
Sbjct: 35  STSLRDPVFFSIYKTILDYYHKYKENLPKYTTEELNFP 72


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 496 LKLENGWTDLANFGLELFVGSPERV*KVY 582
           L  +NG   L +FG  + +G+P  + K Y
Sbjct: 187 LMSKNGQPKLTDFGSSVLIGAPNEIDKFY 215


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 152 SKRRTCVSHLLKNLAARILSTTVRVCWKQ-HTLRAPSVASLYLGPG 18
           S+ +   SHL+ N   R   TT  V  +Q H    P V+S Y G G
Sbjct: 341 SREQYSQSHLISN-ENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFG 385


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 302 YNNNKYFFAHWSTSYVIV*KQIP 234
           YNNN Y    +  +Y+I  +QIP
Sbjct: 106 YNNNNYNKKLYYKNYIINIEQIP 128


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 661 NQKESVRRETHRKEKQNCYY 602
           +QKE VRR++ RK     Y+
Sbjct: 256 HQKELVRRDSRRKNYGGVYH 275


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 91  VDKILAAKFLRRWETHVLRLEENHIVSKTVSFTYINPVY 207
           +D+I +  FL  +  H L L +N +  +TV     N ++
Sbjct: 371 IDRIESNAFLPLYNLHTLELSDNKL--RTVGAQLFNGLF 407


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 177  RFRYNVVFFQTENMRLPSPQEFGSEDLVNHR 85
            R  Y  +     N R P P   GS + ++HR
Sbjct: 1686 RHMYEELNHCAPNRRCPPPPRMGSAEGLSHR 1716


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 569 TLSGLPTNNSRPKLAKSVQPFSSFSETNEQQLIFILYQ 456
           T+ G  TN+ + KLA  +    S S   ++ + + ++Q
Sbjct: 210 TIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQ 247


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,031
Number of Sequences: 438
Number of extensions: 4471
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)