Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31306
(320 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 90 3e-19
05_05_0093 + 22336593-22337198,22338123-22339076 31 0.20
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799... 29 0.62
08_02_0301 - 15503184-15504773,15504790-15504873 29 1.1
05_03_0446 + 14111667-14111906,14112011-14112418 29 1.1
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 28 1.4
01_06_1114 + 34619597-34619972,34620772-34620852,34621294-346213... 28 1.4
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 3.3
03_05_0953 + 29111030-29111105,29112250-29113520 27 3.3
01_05_0342 - 21147940-21148213,21149626-21149697,21150273-211503... 27 3.3
12_02_0385 + 18424617-18425594,18426811-18426850,18427581-184276... 27 4.3
06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 27 4.3
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 27 4.3
03_02_0805 + 11382631-11384747,11385012-11385095,11385181-11385376 27 4.3
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 26 5.7
07_01_0738 + 5626062-5626862 26 5.7
12_01_0305 + 2304572-2304677,2305414-2305481,2305585-2305716,230... 26 7.6
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 26 7.6
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 26 7.6
07_03_1604 - 28089032-28089079,28089161-28089371,28089484-280898... 26 7.6
07_01_1181 + 11203073-11203604,11204124-11204143 26 7.6
06_01_0025 - 244068-244177,244279-244333,244500-244527,244621-24... 26 7.6
04_04_0845 - 28646547-28646637,28646724-28646854,28647832-286479... 26 7.6
03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435 26 7.6
03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223 26 7.6
01_07_0172 + 41704905-41706170 26 7.6
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 90.2 bits (214), Expect = 3e-19
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = +3
Query: 54 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 233
+S +E+AC +ALIL DD + +T EKI+T++KAA + VE YWPGLFAK LE +V DLI
Sbjct: 1 MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60
Query: 234 NIGSGVGAAPAA 269
++GSG GAAP A
Sbjct: 61 SVGSGGGAAPVA 72
>05_05_0093 + 22336593-22337198,22338123-22339076
Length = 519
Score = 31.1 bits (67), Expect = 0.20
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = -2
Query: 271 PAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 92
PAA + P + V RTLM LA G+ + T + ++ E+ SP+ T TR
Sbjct: 296 PAAASGPASGVLFVCTHRTLMDPVVLATVLGRRVAAVTYSISRLSEVLSPI-PTVRLTRD 354
Query: 91 R----AE*THANSAFDTIFSFERASCRRP*IKR 5
R A+ S D E +CR P + R
Sbjct: 355 RGVDAAQMRAELSRGDVAVCPEGTTCREPFLLR 387
>02_02_0220 -
7992124-7992351,7992458-7992562,7993499-7993711,
7993937-7994196,7994425-7994701,7995226-7995371,
7995519-7995903,7996680-7996964
Length = 632
Score = 29.5 bits (63), Expect = 0.62
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 18 GLRQLARSKLKMVSKAELACVYSALILVDDDVAVTGEKIST 140
G+R+LA+ V+K + S +L+ +DVA+TG+ ++T
Sbjct: 249 GIRKLAQIFQSSVAKKKAVGKKSKALLLGEDVAITGDCVTT 289
>08_02_0301 - 15503184-15504773,15504790-15504873
Length = 557
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 298 MQQQRLALHPAAGAAPTPEPMLVIRSRTLMPSKALANR 185
+Q R AL PAAGA P P +++ R R+ + S L R
Sbjct: 67 IQNLRFAL-PAAGAVPRPAAVVLPRGRSELTSAVLCAR 103
>05_03_0446 + 14111667-14111906,14112011-14112418
Length = 215
Score = 28.7 bits (61), Expect = 1.1
Identities = 25/83 (30%), Positives = 35/83 (42%)
Frame = -2
Query: 268 AAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMR 89
A+ AAP P+ R +L P+K+LA+ S+S AA TA S + R
Sbjct: 96 ASPAAPGPKRFTARRHVSLRPTKSLAHLSPARASSSAAAG------GGSATAPSGACRYD 149
Query: 88 AE*THANSAFDTIFSFERASCRR 20
E ++A D S RR
Sbjct: 150 VEGSYAARCLDVFASASAGEQRR 172
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 274 HPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAA 149
+P + AP P P+L++ +TL+P A A + G AAA
Sbjct: 20 YPPSSPAPPPRPLLLL-PKTLIPPAAAAMEFPRRGRRDVAAA 60
>01_06_1114 +
34619597-34619972,34620772-34620852,34621294-34621394,
34621958-34622045,34622192-34622457
Length = 303
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 271 PAAGAAPTPEPMLVIRSRTLMPSKALANRPGQY 173
P AG P+ EP + +S + PS++ + PG++
Sbjct: 139 PMAGLGPSTEPQMPEKSPSASPSESSNHAPGRF 171
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 27.1 bits (57), Expect = 3.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 126 HQLRQHHHPPG*EQSKH 76
HQ R+HHHPP + H
Sbjct: 562 HQRRRHHHPPAWDVEGH 578
>03_05_0953 + 29111030-29111105,29112250-29113520
Length = 448
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -2
Query: 268 AAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTS-----TAAAFKMVEIFSPVTATSS 104
AAG AP P + + PS A A PGQ + +AAA + +P TAT++
Sbjct: 352 AAGLAPAMAPAAAAPTLPVKPSPAPARLPGQQPQVTPLQPGSAAAAGPSALCAPGTATTT 411
Query: 103 S 101
+
Sbjct: 412 A 412
>01_05_0342 -
21147940-21148213,21149626-21149697,21150273-21150397,
21150625-21150684,21150824-21150902,21151041-21151126,
21151224-21151544
Length = 338
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 280 ALHPAAGAAPTPEPMLVIRSRTLMPSKAL 194
AL P AAP P P LV S T PS L
Sbjct: 4 ALLPGCLAAPPPPPPLVTTSSTASPSAHL 32
>12_02_0385 +
18424617-18425594,18426811-18426850,18427581-18427636,
18428032-18428151
Length = 397
Score = 26.6 bits (56), Expect = 4.3
Identities = 18/74 (24%), Positives = 28/74 (37%)
Frame = -2
Query: 310 PERRMQQQRLALHPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEI 131
P R ++ L P + + P P +L I P+ + P + AA + E
Sbjct: 9 PRRLLRHPLLHSMPLSSSPPDPRELLRIERILSTPTSSSTPPPQRQEGPRPAATSSLHET 68
Query: 130 FSPVTATSSSTRMR 89
P A S+S R
Sbjct: 69 AGPTAAESASLLRR 82
>06_01_0469 +
3322886-3323564,3324033-3324953,3325025-3325155,
3325237-3325317,3328173-3328820
Length = 819
Score = 26.6 bits (56), Expect = 4.3
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 27 QLARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALE 206
Q A LK K +AC L+LV DD T T+ KA A D+ G +AL
Sbjct: 657 QAADHALKRQVKHSVACGVDWLVLVSDDSDFT----DTVRKARAADLRTVVVGDGCRALG 712
Query: 207 GI 212
+
Sbjct: 713 SV 714
>03_05_0725 + 27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 26.6 bits (56), Expect = 4.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -2
Query: 259 AAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRA 86
AAPTP P I A+A+ P + T+ AAA S +T +SSS M +
Sbjct: 1796 AAPTPAPAAAIAPSQQEAGVAVASSPHEAQKTAAAAA------ASQLTRSSSSRAMES 1847
>03_02_0805 + 11382631-11384747,11385012-11385095,11385181-11385376
Length = 798
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 134 FHHLESGGCRCRAILARSVRQSLGRHQCP*PDHQHRLWSGCCSGRWV 274
FHH + G C CR + ++ R + P + +WS S WV
Sbjct: 692 FHHFKDGFCSCRDYWIQVSKRPFDR-EVHHPLQANCIWSIVLSRSWV 737
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 200 GFGEQTWPIW--LYIYSRRFQDGGNFLTSYG 114
G G+ +W +Y +S + QDG NF+ G
Sbjct: 627 GAGKGLMTVWHAMYSHSSKIQDGSNFIDETG 657
>07_01_0738 + 5626062-5626862
Length = 266
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -2
Query: 247 PEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 98
P+ L R RT++ K L Q T + A + P ATS+ST
Sbjct: 102 PDSPLASRIRTILTHKKLKKSMPQPTITFSTAVYHHARSTVPAAATSTST 151
>12_01_0305 +
2304572-2304677,2305414-2305481,2305585-2305716,
2307813-2307971,2308170-2308547
Length = 280
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 301 RMQQQRLALHPAAGAAPT-PEPM 236
+ Q+R+ LHP AAP P PM
Sbjct: 167 KQHQRRMGLHPQPSAAPAFPAPM 189
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 319 SPRPERRMQQQRLALHPAAGAAPTPEP 239
SP P R R++ GAAPTP+P
Sbjct: 277 SPSPPRGGGVARVSSRRPEGAAPTPQP 303
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 174 MALHLQPPLSRWWKFSHQLRQHHHPP 97
+ LH +P L W +F +QH P
Sbjct: 4466 LVLHFEPYLMNWSEFDQLQKQHEENP 4491
>07_03_1604 -
28089032-28089079,28089161-28089371,28089484-28089853,
28090034-28090199
Length = 264
Score = 25.8 bits (54), Expect = 7.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 76 VFTLLSSWWMMMLP 117
+F+++SSWWM LP
Sbjct: 30 LFSIISSWWMNPLP 43
>07_01_1181 + 11203073-11203604,11204124-11204143
Length = 183
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -2
Query: 283 LALHPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSS 104
+A P APTP P +R+ + A A S+S + ++ FS V +S+
Sbjct: 1 MAASPLPRWAPTPSPTRPLRTPGTPSAGAGAASSSSSSSSSWRSCVPLLTTFSSVFGSSA 60
Query: 103 STR 95
+ R
Sbjct: 61 ARR 63
>06_01_0025 -
244068-244177,244279-244333,244500-244527,244621-244691,
244829-244926,245069-245186,245573-245636,245744-245808,
245893-245928,246255-246311,246422-246691
Length = 323
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 198 LWRTDLANMALHLQPPLSRWWKFSHQLRQH 109
+W+TD H + L W F H+LRQH
Sbjct: 234 VWQTDCIARVSH-EDGLVVGWIFLHELRQH 262
>04_04_0845 -
28646547-28646637,28646724-28646854,28647832-28647938,
28648043-28648121,28648578-28648667,28648814-28649065,
28649367-28649519,28649631-28649955,28650069-28650283
Length = 480
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 180 PGLFAKALEGINVRDLITNIGSGVGAAPAA 269
PG+F KAL+ + ++ G G+ P A
Sbjct: 358 PGIFRKALQDVEIKGYTIPAGWGIMVCPPA 387
>03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435
Length = 415
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 48 KMVSKAELACVYSALILVDDDVAVTGEKIS---TILKAAAVDVEPYWPGLFAKALEGI 212
+++ +L V + + +VD + T +++ I KA V+ + PGL AKA GI
Sbjct: 155 RVLEGEKLPVVTAKITMVDLPLGATEDRVCGTIDIEKALTDGVKAFEPGLLAKANRGI 212
>03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223
Length = 219
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 201 LEGINVRDLITNIGSGVGAAPAA 269
L G+N+ DL+ G G GA AA
Sbjct: 28 LHGVNLDDLLRTGGGGAGAGAAA 50
>01_07_0172 + 41704905-41706170
Length = 421
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 283 LALHPAAGAAPTPEPMLVIRSRT 215
+ LHPAA A+PTP P +V R+
Sbjct: 1 MPLHPAAAASPTP-PWMVRELRS 22
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,599,948
Number of Sequences: 37544
Number of extensions: 219359
Number of successful extensions: 835
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -