Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31300
(332 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical pr... 41 2e-04
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 41 2e-04
AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical... 40 6e-04
Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 36 0.009
Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 36 0.009
Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical p... 35 0.016
Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical p... 35 0.016
Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical pr... 35 0.016
AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical... 33 0.050
L08970-1|AAA53660.1| 627|Caenorhabditis elegans choline acetylt... 29 1.1
L08969-1|AAA53659.1| 627|Caenorhabditis elegans choline acetylt... 29 1.1
AF039051-3|AAB94261.2| 347|Caenorhabditis elegans Hypothetical ... 29 1.1
AF036701-3|AAB88370.1| 627|Caenorhabditis elegans Abnormal chol... 29 1.1
AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical ... 28 1.9
AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 28 1.9
Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical pr... 27 2.5
U53139-10|AAK18937.1| 381|Caenorhabditis elegans Serpentine rec... 27 4.3
Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical pr... 26 7.5
AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical... 26 7.5
AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical ... 26 7.5
AF026204-2|AAB71251.2| 247|Caenorhabditis elegans Hypothetical ... 26 7.5
Z19152-4|CAA79538.2| 455|Caenorhabditis elegans Hypothetical pr... 25 10.0
AY533305-1|AAS21307.1| 455|Caenorhabditis elegans BRE-3 protein. 25 10.0
AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical... 25 10.0
>U64852-5|AAB04968.1| 746|Caenorhabditis elegans Hypothetical
protein W01A11.5 protein.
Length = 746
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +1
Query: 211 LPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLVKDFI 330
LP LPVP L+ T+++YL +++ L++QEYEI +F+
Sbjct: 148 LPSLPVPALKDTISEYLDSMKHILSEQEYEIVAKQAHEFL 187
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +1
Query: 208 NLPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLVKDF 327
+LP LP+P+LE T+ KYLK++ P + E E +L DF
Sbjct: 11 SLPSLPLPELEETIGKYLKSLVPIVPKDELETITTLANDF 50
>AL110485-26|CAB60359.3| 779|Caenorhabditis elegans Hypothetical
protein Y46G5A.17 protein.
Length = 779
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/39 (41%), Positives = 29/39 (74%)
Frame = +1
Query: 211 LPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLVKDF 327
LPRLP+P L+ T+ K+L +++P L+D+E++ + L + F
Sbjct: 172 LPRLPLPNLDDTVRKHLLSMKPILSDEEFQELEFLSERF 210
>Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 133 LLEPYTCCHQITSNYVSAKYSTNVQNLPRLPVP-KLETTLNKYLKTVRPHLNDQEYEITK 309
LLE H+ + S +N+PR+P+ +++T ++ +L+++R + +QE K
Sbjct: 120 LLETIEESHKERIRVIDETRSKKEENIPRIPIELEVKTAVSSHLQSIRKEMVEQEKHEIK 179
Query: 310 SLVKDFI 330
L ++F+
Sbjct: 180 KLYEEFL 186
>Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 133 LLEPYTCCHQITSNYVSAKYSTNVQNLPRLPVP-KLETTLNKYLKTVRPHLNDQEYEITK 309
LLE H+ + S +N+PR+P+ +++T ++ +L+++R + +QE K
Sbjct: 120 LLETIEESHKERIRVIDETRSKKEENIPRIPIELEVKTAVSSHLQSIRKEMVEQEKHEIK 179
Query: 310 SLVKDFI 330
L ++F+
Sbjct: 180 KLYEEFL 186
>Z81107-10|CAB03233.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 205 QNLPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLVKDF 327
++L RLP+PKL T+N+YL + + L+ + T++ ++ F
Sbjct: 40 KSLRRLPIPKLPDTVNRYLASSKAVLSPDVFAKTEATIRSF 80
>Z73103-11|CAA97431.1| 646|Caenorhabditis elegans Hypothetical
protein R07H5.2a protein.
Length = 646
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 205 QNLPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLVKDF 327
++L RLP+PKL T+N+YL + + L+ + T++ ++ F
Sbjct: 40 KSLRRLPIPKLPDTVNRYLASSKAVLSPDVFAKTEATIRSF 80
>Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical
protein B0395.3 protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.016
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 181 SAKYSTNVQNLPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLVKDFI 330
+A+Y N +LP+LP P+ TL +L + + +E++ TK +V DF+
Sbjct: 14 AARY--NSTDLPKLPAPQPIKTLKHFLDFAQALQSKKEFQETKQIVNDFV 61
>AF022981-11|AAG24207.1| 746|Caenorhabditis elegans Hypothetical
protein W03F9.4 protein.
Length = 746
Score = 33.1 bits (72), Expect = 0.050
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 211 LPRLPVPKLETTLNKYLKTVRPHLNDQEY 297
LP L PK+E T+ KYL+T++P L ++E+
Sbjct: 145 LPWLLPPKVEDTVAKYLQTMKPILGEKEF 173
>L08970-1|AAA53660.1| 627|Caenorhabditis elegans choline
acetyltransferase protein.
Length = 627
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 211 LPRLPVPKLETTLNKYLK 264
LP+ PVP LE TL++YL+
Sbjct: 20 LPKPPVPSLEATLDRYLE 37
>L08969-1|AAA53659.1| 627|Caenorhabditis elegans choline
acetyltransferase protein.
Length = 627
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 211 LPRLPVPKLETTLNKYLK 264
LP+ PVP LE TL++YL+
Sbjct: 20 LPKPPVPSLEATLDRYLE 37
>AF039051-3|AAB94261.2| 347|Caenorhabditis elegans Hypothetical
protein C14C6.3 protein.
Length = 347
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 57 NNHEFVSFIIPMLRRINIMNAYKGIFIRTLYLLPSNNKQLCFCQIFYKRPKFTPSTCAKA 236
N E V+ +P + +N IF+ L L N++ L +FY+ K+ PS +
Sbjct: 103 NQFELVNGTVPSPTKTTKLNTRCCIFVDPLILENVNDQYLHLDGLFYQAWKYFPSMRDEL 162
Query: 237 RDYIK 251
Y+K
Sbjct: 163 SGYLK 167
>AF036701-3|AAB88370.1| 627|Caenorhabditis elegans Abnormal choline
acetyltransferaseprotein 1, isoform b protein.
Length = 627
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 211 LPRLPVPKLETTLNKYLK 264
LP+ PVP LE TL++YL+
Sbjct: 20 LPKPPVPSLEATLDRYLE 37
>AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical
protein C17B7.8 protein.
Length = 558
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 54 KNNHEFVSFIIPMLRRINIMNAYKGIF 134
KNN E SF + L IN+ N +K F
Sbjct: 106 KNNSERFSFAVEKLENINLTNKFKKFF 132
>AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical
protein Y48G9A.10 protein.
Length = 722
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/46 (26%), Positives = 29/46 (63%)
Frame = +1
Query: 160 QITSNYVSAKYSTNVQNLPRLPVPKLETTLNKYLKTVRPHLNDQEY 297
+I S+ + S+ + L LP+P+LE T+ +Y +++ ++++E+
Sbjct: 111 KILSHVAPPQLSSCDRLLSNLPLPRLEDTVTRYTDSMKFVISEEEH 156
>Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical
protein T20B3.1 protein.
Length = 608
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 211 LPRLPVPKLETTLNKYLKTVRPHLNDQE 294
LP LPVP L TL KY+ + L E
Sbjct: 10 LPSLPVPSLVETLEKYIDSASAILTPAE 37
>U53139-10|AAK18937.1| 381|Caenorhabditis elegans Serpentine
receptor, class w protein69 protein.
Length = 381
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 24 GRDENKRKSIKNNHEFVSFIIPMLRRINIMNAYKGIFIRTLYLLPSNNKQL 176
G DE+ ++++ N F+S + M I+++ A G + +LL K +
Sbjct: 12 GFDESTKRNLANVGNFISKVSEMSLEIHLLLACIGAVVNVFHLLILTRKSM 62
>Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical protein
T06D8.10 protein.
Length = 1490
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/47 (27%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 181 SAKYSTNVQN-LPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLV 318
+AK++ N + ++ + + + +KYLKT++P++ D E+T + V
Sbjct: 1358 AAKFTPGQLNEIRKVKLASIFCSNSKYLKTIQPNVFDVTDELTNAQV 1404
>Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical protein
T06D8.10 protein.
Length = 1490
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/47 (27%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 181 SAKYSTNVQN-LPRLPVPKLETTLNKYLKTVRPHLNDQEYEITKSLV 318
+AK++ N + ++ + + + +KYLKT++P++ D E+T + V
Sbjct: 1358 AAKFTPGQLNEIRKVKLASIFCSNSKYLKTIQPNVFDVTDELTNAQV 1404
>AL033536-10|CAN86926.1| 345|Caenorhabditis elegans Hypothetical
protein Y53C10A.6b protein.
Length = 345
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 180 FCQIFYKRPKFTPSTCAKARDYIK*IFENS*ASLKR 287
F ++ K PKF AR+ I+ IF+ S +L+R
Sbjct: 248 FYRVMIKEPKFQQMGPLDARNEIRRIFDESNVNLRR 283
>AL033536-9|CAA22140.1| 344|Caenorhabditis elegans Hypothetical
protein Y53C10A.6a protein.
Length = 344
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 180 FCQIFYKRPKFTPSTCAKARDYIK*IFENS*ASLKR 287
F ++ K PKF AR+ I+ IF+ S +L+R
Sbjct: 248 FYRVMIKEPKFQQMGPLDARNEIRRIFDESNVNLRR 283
>AF026204-2|AAB71251.2| 247|Caenorhabditis elegans Hypothetical
protein C30E1.6 protein.
Length = 247
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 114 NAYKGIFIRTLYLLPSNNKQLCFC-QIFYKRP 206
+ Y IFI+T+ ++ + + FC Q +Y+RP
Sbjct: 30 DGYPIIFIKTIAMIAMISSAMFFCYQYYYERP 61
>Z19152-4|CAA79538.2| 455|Caenorhabditis elegans Hypothetical
protein B0464.4 protein.
Length = 455
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 287 SFK*GLTVFKYLFNVVSSFGTGRRGKFWTFVEYLA 183
SF L ++ Y+F VV SF R YLA
Sbjct: 383 SFVGALNLYMYIFGVVKSFSHKYRNSLLRLAMYLA 417
>AY533305-1|AAS21307.1| 455|Caenorhabditis elegans BRE-3 protein.
Length = 455
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 287 SFK*GLTVFKYLFNVVSSFGTGRRGKFWTFVEYLA 183
SF L ++ Y+F VV SF R YLA
Sbjct: 383 SFVGALNLYMYIFGVVKSFSHKYRNSLLRLAMYLA 417
>AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical
protein F43E2.7a protein.
Length = 272
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 27 RDENKRKSIKNNHEFVSFIIPML 95
+DE K K+ K+ H+F+ +P L
Sbjct: 171 KDETKAKAAKDVHKFIHTAVPFL 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,150,783
Number of Sequences: 27780
Number of extensions: 137028
Number of successful extensions: 360
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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