Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31289
         (318 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127769-1|AAI27770.1|  339|Homo sapiens transmembrane protein 1...    33   0.24 
BC127768-1|AAI27769.1|  339|Homo sapiens transmembrane protein 1...    33   0.24 
BC051850-1|AAH51850.1|  343|Homo sapiens transmembrane protein 1...    33   0.24 
AF327923-1|AAK16442.1|  343|Homo sapiens transmembrane protein i...    33   0.24 
BC109285-1|AAI09286.1|  392|Homo sapiens LASS6 protein protein.        28   6.9  
BC109284-1|AAI09285.1|  392|Homo sapiens LASS6 protein protein.        28   6.9  
AK172775-1|BAD18757.1|  384|Homo sapiens protein ( Homo sapiens ...    28   6.9  

>BC127769-1|AAI27770.1|  339|Homo sapiens transmembrane protein 120B
           protein.
          Length = 339

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 271
           FN LLV +   L + +SI + N SR  GWW+
Sbjct: 160 FNFLLVWYYCTLTIRESILISNGSRIKGWWV 190


>BC127768-1|AAI27769.1|  339|Homo sapiens transmembrane protein 120B
           protein.
          Length = 339

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 271
           FN LLV +   L + +SI + N SR  GWW+
Sbjct: 160 FNFLLVWYYCTLTIRESILISNGSRIKGWWV 190


>BC051850-1|AAH51850.1|  343|Homo sapiens transmembrane protein 120A
           protein.
          Length = 343

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 271
           FN LLV +   L + +SI + N SR  GWW+
Sbjct: 164 FNFLLVWYYCTLTIRESILINNGSRIKGWWV 194


>AF327923-1|AAK16442.1|  343|Homo sapiens transmembrane protein
           induced by tumor necrosis factor alpha protein.
          Length = 343

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWWI 271
           FN LLV +   L + +SI + N SR  GWW+
Sbjct: 164 FNFLLVWYYCTLTIRESILINNGSRIKGWWV 194


>BC109285-1|AAI09286.1|  392|Homo sapiens LASS6 protein protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 295 NQRHCY*QYPPTALTTSVFHLYAL 224
           N RHC+  YP   LTT + + Y L
Sbjct: 161 NTRHCWYNYPYQPLTTDLHYYYIL 184


>BC109284-1|AAI09285.1|  392|Homo sapiens LASS6 protein protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 295 NQRHCY*QYPPTALTTSVFHLYAL 224
           N RHC+  YP   LTT + + Y L
Sbjct: 161 NTRHCWYNYPYQPLTTDLHYYYIL 184


>AK172775-1|BAD18757.1|  384|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23936 fis, clone COLF1951. ).
          Length = 384

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 295 NQRHCY*QYPPTALTTSVFHLYAL 224
           N RHC+  YP   LTT + + Y L
Sbjct: 161 NTRHCWYNYPYQPLTTDLHYYYIL 184


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,162,669
Number of Sequences: 237096
Number of extensions: 594503
Number of successful extensions: 1479
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)