Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31289
         (318 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase...    27   5.2  
AL133506-1|CAB65846.1|  387|Drosophila melanogaster EG:BACN33B1....    26   9.1  
AE014298-465|AAS65258.1|  387|Drosophila melanogaster CG32795-PC...    26   9.1  
AE014298-464|AAF45824.2|  387|Drosophila melanogaster CG32795-PB...    26   9.1  
AE014298-463|AAF45825.2|  387|Drosophila melanogaster CG32795-PA...    26   9.1  
AE014134-1283|AAF52520.2|  452|Drosophila melanogaster CG13788-P...    26   9.1  

>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
            protein.
          Length = 1924

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 310  RCSRCNQRHCY 278
            RC RCN  HCY
Sbjct: 1058 RCGRCNNSHCY 1068


>AL133506-1|CAB65846.1|  387|Drosophila melanogaster EG:BACN33B1.2
           protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWW 268
           F  LLV +   L + +SI   N SR  GWW
Sbjct: 157 FIFLLVWYYCTLTIRESILKVNGSRIKGWW 186


>AE014298-465|AAS65258.1|  387|Drosophila melanogaster CG32795-PC,
           isoform C protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWW 268
           F  LLV +   L + +SI   N SR  GWW
Sbjct: 157 FIFLLVWYYCTLTIRESILKVNGSRIKGWW 186


>AE014298-464|AAF45824.2|  387|Drosophila melanogaster CG32795-PB,
           isoform B protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWW 268
           F  LLV +   L + +SI   N SR  GWW
Sbjct: 157 FIFLLVWYYCTLTIRESILKVNGSRIKGWW 186


>AE014298-463|AAF45825.2|  387|Drosophila melanogaster CG32795-PA,
           isoform A protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 179 FNILLVSFNFFLCLLQSIKMKNRSRQSGWW 268
           F  LLV +   L + +SI   N SR  GWW
Sbjct: 157 FIFLLVWYYCTLTIRESILKVNGSRIKGWW 186


>AE014134-1283|AAF52520.2|  452|Drosophila melanogaster CG13788-PA,
           isoform A protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +1

Query: 76  THISANLLEKYFLKSVEKKNIVKVYT 153
           T I   LL KYFLKSV  KN+V+V T
Sbjct: 115 TFILPLLLRKYFLKSV--KNMVQVDT 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,951,081
Number of Sequences: 53049
Number of extensions: 201348
Number of successful extensions: 463
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)