Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31289
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF125448-6|AAD12811.1| 160|Caenorhabditis elegans Hypothetical ... 27 3.9
Z82051-3|CAB04817.1| 337|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z77136-1|CAB00880.1| 606|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical p... 25 8.9
Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 25 8.9
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 25 8.9
U00047-13|AAY43978.1| 301|Caenorhabditis elegans Hypothetical p... 25 8.9
>Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical
protein T10H4.3 protein.
Length = 350
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 137 MFFFSTLFRKYFSNRFADICVNLLGELKYVRRNGKC 30
M+ FS F Y +F++I VNLL + R+N +C
Sbjct: 1 MYNFSENFNNYV--QFSNILVNLLHLMVLTRKNPRC 34
>AF125448-6|AAD12811.1| 160|Caenorhabditis elegans Hypothetical
protein H14E04.4 protein.
Length = 160
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = -1
Query: 240 FIFMLCKRHKKKLNETRRILNF 175
F+ LC ++K+K ++T +++NF
Sbjct: 90 FLSTLCSKNKQKTSKTAKVMNF 111
>Z82051-3|CAB04817.1| 337|Caenorhabditis elegans Hypothetical
protein T23D5.6 protein.
Length = 337
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 155 AIYTSCVKFNILLVSFNFFLCLLQSIKMKNRSRQSGWWILL 277
A+YT F I L++ F + K+ +GW+ LL
Sbjct: 94 AVYTGLYSFTISLLAVQFIYRFIAVFHPKDLKYFNGWYFLL 134
>Z77136-1|CAB00880.1| 606|Caenorhabditis elegans Hypothetical
protein ZC376.1 protein.
Length = 606
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 155 HVYTLTMFFFSTLFRKYFSNRFA 87
H YT + F+ST +K FS RF+
Sbjct: 464 HYYTRALDFWSTAGKKSFSERFS 486
>Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 4 DSALRRFSTHLPLRLTYFSSPRRLTHISANLLEKYF 111
D L+ + +LP LT+ S + H++ N+L+KYF
Sbjct: 340 DEPLKLVTEYLP-NLTHLSL--EINHLNTNILQKYF 372
>Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 4 DSALRRFSTHLPLRLTYFSSPRRLTHISANLLEKYF 111
D L+ + +LP LT+ S + H++ N+L+KYF
Sbjct: 340 DEPLKLVTEYLP-NLTHLSL--EINHLNTNILQKYF 372
>Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 197 SFNFFLCLLQSIKMKNRSRQSGWWILLVTMA 289
S NF +CL ++ + K +S + + + + T+A
Sbjct: 344 SLNFLVCLYKAYQTKQKSSNNEYQLTIATLA 374
>Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 197 SFNFFLCLLQSIKMKNRSRQSGWWILLVTMA 289
S NF +CL ++ + K +S + + + + T+A
Sbjct: 344 SLNFLVCLYKAYQTKQKSSNNEYQLTIATLA 374
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 139 QCFFFQHFSENIFPIGSPIYV 77
+CFF F FP GSP+Y+
Sbjct: 36 KCFFRSIFKIGHFPRGSPLYL 56
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 53 ILAHRED*HIYRRTYWKNIF*KVLKKKTLSKCTRAIYTSCVKFNILLVSFNFFLCLLQSI 232
I AH ++ HI+ T K+ L KK L+ T + + KF+ ++ N+ +L
Sbjct: 1034 IKAHSQNGHIFTLTIDKSTLSAYLFKKRLALATNSGSGTIQKFDSVIADGNWHQIILNPH 1093
Query: 233 KM 238
K+
Sbjct: 1094 KV 1095
>U00047-13|AAY43978.1| 301|Caenorhabditis elegans Hypothetical
protein ZK418.11 protein.
Length = 301
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 143 KCTRAIYTSCVKFNILLVSFNFF---LCLLQSIKMKNRSRQSGWWILLVTMAL 292
KC R + C+ N+ + SF+ + L+Q + + RQ ++ VT L
Sbjct: 33 KCPRRKFYECINANMRIASFDIYSNKFKLIQDLMSSDAERQKIFYTCHVTADL 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,853,757
Number of Sequences: 27780
Number of extensions: 116301
Number of successful extensions: 298
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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