Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31284
(590 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 32 0.39
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209... 30 1.2
06_01_0655 + 4742267-4742531,4743313-4744136 30 1.2
10_07_0009 - 11770674-11771000,11771079-11771378,11771487-11771807 29 2.8
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 28 4.8
11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328,108... 28 4.8
02_05_0374 + 28381456-28381785,28382302-28382555,28382665-283827... 28 4.8
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 28 6.4
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 28 6.4
03_04_0214 + 18688480-18688832,18688956-18688999,18689039-186891... 28 6.4
03_02_1029 - 13488535-13493037 28 6.4
03_02_1026 + 13313672-13313876,13341211-13342005,13363815-133638... 28 6.4
02_05_0994 - 33369971-33370759,33370856-33370956,33371092-333710... 28 6.4
01_05_0178 - 18971075-18971863,18971960-18972197,18972791-18973041 28 6.4
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558... 27 8.5
>01_05_0687 +
24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 31.9 bits (69), Expect = 0.39
Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Frame = +3
Query: 90 GDHGISTANESSSSMPDPTEGHQNISLKD----LKMAMEVLNLQQKPAKTTE--EALHKA 251
GD S A P P EG + S + A E + + P T E+ +
Sbjct: 185 GDEEGSHAAPEPPPPPTPLEGGPDASSAEPAAMASRAREPMGSRTAPEPPTPPLESGQEG 244
Query: 252 YQFWSTQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQWDTL 392
+Q P P + ++EP ELP P YT PD + D +
Sbjct: 245 FQQQQPHPPPTTHPECDSSEPAELPLPPTSPAEIAYTSPDSVEVDVV 291
>06_03_0914 +
25920277-25920405,25920783-25920810,25920890-25920990,
25921356-25921479,25921793-25921903,25922222-25922397,
25922766-25922848,25922935-25923007,25923630-25923695,
25923776-25923818,25924600-25924739,25924878-25925090,
25925397-25925481,25925558-25925852,25926855-25927110,
25927237-25927450,25927701-25927912,25928054-25928203
Length = 832
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/89 (29%), Positives = 41/89 (46%)
Frame = +3
Query: 102 ISTANESSSSMPDPTEGHQNISLKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVP 281
+ T + + S +P H + K+ K+ V+ Q P T L K+ W Q +
Sbjct: 582 LPTVSSTEKSEEEPI--HSSEDSKESKVKPYVIMDHQIPNMITLSLLPKSQ--W--QSLA 635
Query: 282 KMDEKIIANEPIELPKSPEEIRAEPYTLP 368
+D + N+PIE PK PE+ P+ LP
Sbjct: 636 NLDIIKVRNKPIEPPKKPEK---APFFLP 661
>06_01_0655 + 4742267-4742531,4743313-4744136
Length = 362
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 18 DFSKENDEKPQXXXXXXXXXRGGDGDHGISTANESSSSMPDPTEGHQNISLKDLKMAMEV 197
DFS+END K G D N +S +M P G+ +I L DL+ M+
Sbjct: 263 DFSQENDIKTPDITSMLAPTMTGVDDSAF-LQNNASDAMVPPVMGNASIDLADLEPYMKF 321
Query: 198 L 200
L
Sbjct: 322 L 322
>10_07_0009 - 11770674-11771000,11771079-11771378,11771487-11771807
Length = 315
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 198 LNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 344
++ Q KP TT +A + +PK +IIA + + LP SP +I
Sbjct: 1 MSQQGKPISTTTSGSSRARTPRTGNKIPKERFRIIAVDAVGLPTSPRKI 49
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 267 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 383
T P+ K ++ ANE E+ K EE++ + Y P W
Sbjct: 17 TTPLHKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 55
>11_01_0130 -
1079515-1079685,1079847-1079961,1080237-1080328,
1080435-1080520,1080957-1081056,1082180-1082210,
1082416-1082471
Length = 216
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 153 HQNISLKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKI--IANEPI--E 320
HQ++S+ D++ A+E N + + +EAL + +++ ++ + E + E
Sbjct: 119 HQSVSIDDIENAIEEANEHTENMRQIQEALATPIGASADFDEDELEAELEDLEEEELDHE 178
Query: 321 LPKSPEEIRAEP 356
LP+ P+ R EP
Sbjct: 179 LPEPPQSTRMEP 190
>02_05_0374 +
28381456-28381785,28382302-28382555,28382665-28382773,
28383272-28383410,28383525-28383582,28384179-28384196,
28384301-28384423,28384483-28384681,28384763-28384796,
28385044-28385153
Length = 457
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +3
Query: 165 SLKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 344
++K K + L Q P + T + F+ST V K ++ + + + K P
Sbjct: 270 TIKPTKWSYPGGGLNQIPGECTISGDIRLTPFYSTTSVVKKLQEYVHDINENIEKLPTRG 329
Query: 345 RAEPYTLPDGFQWDTLNLNEPLVLKELYTL 434
Y LPD L +N PL+ +L L
Sbjct: 330 PVSKYVLPDENLRGRLIINSPLLTIDLARL 359
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 267 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 383
T P+ K ++ ANE E+ K EE++ + Y P W
Sbjct: 119 TTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 157
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/80 (25%), Positives = 24/80 (30%)
Frame = +3
Query: 18 DFSKENDEKPQXXXXXXXXXRGGDGDHGISTANESSSSMPDPTEGHQNISLKDLKMAMEV 197
D E D + G DH S + S DP H L+ +A EV
Sbjct: 497 DTDSETDPEETTDLEGSDTAVGATADHCASDEQDEEISQADPNISHVLSDLESFDLASEV 556
Query: 198 LNLQQKPAKTTEEALHKAYQ 257
K K HK Q
Sbjct: 557 SKNSTKKKKEASYKHHKKPQ 576
>03_04_0214 +
18688480-18688832,18688956-18688999,18689039-18689101,
18689883-18689956,18691526-18692017
Length = 341
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 195 VLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKS 332
VLNL+ T+ L PVP+ E+++A P E P+S
Sbjct: 267 VLNLKVGKIVTSVPVLQSTNSLTEPLPVPEPIEEVMAISPFEAPES 312
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 267 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 383
T P+ K ++ ANE E+ K EE++ + Y P W
Sbjct: 561 TTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 599
>03_02_1026 +
13313672-13313876,13341211-13342005,13363815-13363855,
13363967-13364140
Length = 404
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 267 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 383
T P+ K ++ ANE E+ K EE++ + Y P W
Sbjct: 143 TTPLYKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 181
>02_05_0994 -
33369971-33370759,33370856-33370956,33371092-33371093,
33373009-33373610
Length = 497
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 PKMDEKIIANEPIELPKSPEEIR 347
PKMD+++ E + P SPE+I+
Sbjct: 359 PKMDDEVEVMEQMSTPNSPEDIK 381
>01_05_0178 - 18971075-18971863,18971960-18972197,18972791-18973041
Length = 425
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 279 PKMDEKIIANEPIELPKSPEEIR 347
PKMD+++ E + P SPE+I+
Sbjct: 287 PKMDDEVEVMEQMSTPNSPEDIK 309
>08_01_1000 +
10154024-10154147,10155500-10155761,10155839-10155885,
10155967-10155998,10156079-10156146,10156214-10156605,
10156811-10157009,10157494-10157636,10157722-10158366,
10158493-10158551,10158725-10158823
Length = 689
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 303 ANEPIELPKSPEEIRAEPYTLPDGFQWDTLNLNEPLVL 416
A+ ++LP + + TLPD F+ D +NL++ + L
Sbjct: 90 ASVQVDLPLHADHAPFDTITLPDTFRLDDINLDDAIRL 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,781,531
Number of Sequences: 37544
Number of extensions: 322486
Number of successful extensions: 947
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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