Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31283
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   1.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.8  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
 Frame = -3

Query: 406 LTWNPFFTNLLTTAGTTSFILPN----LFWHSY 320
           L W PFFT  L  A   + I P     LFW  Y
Sbjct: 20  LCWLPFFTMYLVRAFCRNCIHPTVFSVLFWLGY 52


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
 Frame = -3

Query: 406 LTWNPFFTNLLTTAGTTSFILPN----LFWHSY 320
           L W PFFT  L  A   + I P     LFW  Y
Sbjct: 468 LCWLPFFTMYLVRAFCRNCIHPTVFSVLFWLGY 500


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 562 SFLTFCISLSRSGRTFKTISDWNV 491
           SF+  CIS+ R     K +  W+V
Sbjct: 126 SFVLVCISMDRYYAVIKPLQLWDV 149


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 606 NLDFEQDRGKISMFLHSLHFVFHYL 532
           +L+F Q RG+   FLH      +YL
Sbjct: 247 SLNFPQIRGEFYFFLHKQVLNRYYL 271


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 559 FLTFCISLSRSGRTFKTISDWNVV 488
           FL        +G   KTI  WNV+
Sbjct: 4   FLWIVFLALANGEEIKTIYSWNVI 27


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 606 NLDFEQDRGKISMFLHSLHFVFHYL 532
           +L+F Q RG+   FLH      +YL
Sbjct: 247 SLNFPQIRGEFYFFLHKQVLNRYYL 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,121
Number of Sequences: 438
Number of extensions: 3119
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)