Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31278
(396 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 145 1e-35
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 144 2e-35
05_01_0043 - 295041-295173,296252-296537,296616-296697 144 2e-35
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 143 5e-35
01_07_0267 + 42410174-42410252,42410679-42411097 132 7e-32
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 64 5e-11
07_03_1215 + 24937016-24937229,24937418-24937623,24938135-249382... 32 0.19
06_03_0363 + 19904002-19905792 32 0.19
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 30 0.59
09_01_0019 + 403078-404211 30 0.78
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 30 0.78
03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319 29 1.0
10_08_0401 + 17629912-17630376 29 1.4
08_02_0341 + 15994817-15994852,15995371-15995439,15995667-159959... 29 1.4
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 3.1
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 27 4.1
04_03_0831 - 20133298-20133401,20133500-20133586,20133984-201340... 27 5.5
05_04_0242 + 19336663-19336789,19337071-19337290,19337392-193374... 27 7.2
11_06_0478 + 24073295-24074172,24074790-24075090 26 9.6
11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075 26 9.6
05_03_0507 + 14814761-14815272,14816215-14816346,14817391-14817403 26 9.6
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 26 9.6
02_01_0468 + 3357043-3357226,3357695-3358155 26 9.6
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 145 bits (351), Expect = 1e-35
Identities = 67/104 (64%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Frame = +3
Query: 87 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 266
PFFG +GAASA+IFS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 267 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGI
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGI 115
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 81 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 254
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 255 YGLVVAVLIA 284
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 144 bits (350), Expect = 2e-35
Identities = 66/104 (63%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Frame = +3
Query: 87 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 266
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 267 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGI
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGI 115
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 81 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVMAGIIAI 254
Y F G +S + G A G A G A + + +P+L + I+ ++ A +A+
Sbjct: 87 YYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALAL 146
Query: 255 YGLVVAVLIA 284
YGL+V ++++
Sbjct: 147 YGLIVGIILS 156
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 144 bits (349), Expect = 2e-35
Identities = 66/104 (63%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Frame = +3
Query: 87 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 266
PFFG +GAASA++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 267 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGI
Sbjct: 73 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGI 116
Score = 33.9 bits (74), Expect = 0.048
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 72 NPIYGPFF---GVMGAASAIIFSALGAAYGTAKSGTGIAAM--SVMRPELIMKSIIPVVM 236
NP P+F G +S + G A G A G A + + +P+L + I+ ++
Sbjct: 82 NPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIF 141
Query: 237 AGIIAIYGLVVAVLIA 284
A +A+YGL+V ++++
Sbjct: 142 AEALALYGLIVGIILS 157
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 143 bits (346), Expect = 5e-35
Identities = 65/104 (62%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
Frame = +3
Query: 87 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLV 266
PFFG +GAA+A++FS +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL+
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 267 VAVLIAGALQEPAN-YPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
+AV+I+ + A Y L+ G+ HL +GLA G +GLAAG AIGI
Sbjct: 74 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGI 117
Score = 28.3 bits (60), Expect = 2.4
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +3
Query: 186 SVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 284
+ +P+L + I+ ++ A +A+YGL+V ++++
Sbjct: 158 NAQQPKLFVGMILILIFAEALALYGLIVGIILS 190
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 132 bits (320), Expect = 7e-32
Identities = 62/110 (56%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Frame = +3
Query: 69 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGII 248
N + PF G +GAA A++FS +GAAYGTA+SG G+A M VMRPEL+MKSI+PVVMAG++
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 249 AIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
IYGL++AV+I + A Y + G +HL AGLA G LAAG AIG+
Sbjct: 66 GIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGV 115
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +3
Query: 105 GAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 284
G A+ + A G A G G+ A + +P+L + I+ ++ A + +YGL+V ++++
Sbjct: 99 GLATGLCALAAGLAIGVV-GDAGVRA-NAQQPKLFVGMILILIFAEALGLYGLIVGIILS 156
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 63.7 bits (148), Expect = 5e-11
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +3
Query: 93 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 272
F +G A +I S LGAA+G +G+ + ++ P + K++I V+ +AIYG++VA
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 273 VLIAGALQEP----ANYP--LYKGFIHLGAGLAVGFSGLAAGFAIGI 395
+++ L+ ++P L G+ +GL VGF+ L G +GI
Sbjct: 80 IILQTKLESVPTALVHHPESLRAGYAIFASGLIVGFANLVCGVCVGI 126
>07_03_1215 +
24937016-24937229,24937418-24937623,24938135-24938207,
24938619-24938812
Length = 228
Score = 31.9 bits (69), Expect = 0.19
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 391 PMAKPAARPENPTAKPAPKWM 329
P AKPAA+P+ P KP P+ M
Sbjct: 91 PAAKPAAKPKKPPVKPLPEMM 111
>06_03_0363 + 19904002-19905792
Length = 596
Score = 31.9 bits (69), Expect = 0.19
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +3
Query: 75 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTG-----IAAMSVMRPELIMKSIIPVVMA 239
PIY +GAA +FS+L + T +A ++R + + P +
Sbjct: 400 PIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVAGATTPGQLR 459
Query: 240 GIIAIYGLVVAVLIAGALQEPANYPL-YKGFIHLGAGLAVGFSGLAA 377
+A LVV I + + Y + G+ G G A G +GLAA
Sbjct: 460 TFLAFLALVVLSSIGVSAYYNSRYARRWPGYAAFGCGWAAGAAGLAA 506
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 353 SQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDR 225
S+ ++ E KG+VG SNQ HD T D +T D++
Sbjct: 190 SRLDNKIAEVDTKGIVG-TKPSASNQHQHDGTTDSRHTVEDEK 231
>09_01_0019 + 403078-404211
Length = 377
Score = 29.9 bits (64), Expect = 0.78
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -2
Query: 266 DQTVDGNNTRHDDRNDRLHDQLRPHHRHXXXXXXXXXXXXXXXXGAEDDSRRRPHNSKEG 87
D T D + + +DR R H + + HHR + SRRR H E
Sbjct: 293 DDTSDEDESGGEDRRRRRHRKRQHHHRKGASDGDSGSGASDSADDRKRSSRRRRHRKSES 352
Query: 86 S 84
S
Sbjct: 353 S 353
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 29.9 bits (64), Expect = 0.78
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 179 RHVGDEA*ADHEVDHSCRHGGYYCHLRSGRGCPDCWCPP 295
R V + AD D CR G SG + +CPP
Sbjct: 16 REVSEALTADSSADEECRRGSSSSSASSGDASSESYCPP 54
>03_01_0551 - 4113134-4113272,4113347-4113507,4113666-4114319
Length = 317
Score = 29.5 bits (63), Expect = 1.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 284 WCPPGASQLPPLQRVHPLG 340
W PPG +LPPL +H G
Sbjct: 44 WAPPGEPRLPPLLLIHGFG 62
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 99 VMGAASAIIFSALGAAYGTAKSGTGIAA 182
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>08_02_0341 +
15994817-15994852,15995371-15995439,15995667-15995973,
15996231-15996253
Length = 144
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 290 GTSNQDSHDQTVDGNNTRHDDRNDRL 213
G + + HD ++DG N +DD D L
Sbjct: 98 GAEDDNGHDVSIDGLNANNDDNGDEL 123
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 386 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 282
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 389 YGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDD 228
YG+ G + + ++ VD P+V G+V + + S + TV T + D
Sbjct: 903 YGDKGPENLTKPGEPASSVDVPYVNGIVD-NSDSVQEEPSVEATVSATETSNVD 955
>04_03_0831 -
20133298-20133401,20133500-20133586,20133984-20134092,
20134272-20134442,20136059-20136208,20136765-20136872,
20137725-20137780,20138061-20138124,20138198-20138209
Length = 286
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 87 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVM 236
P FGV + ++I +G+ Y +SG + A + L + PV++
Sbjct: 9 PTFGVGHSLGSVIHLLIGSRYAVQRSGNILMAFNNKEASLAVPLFSPVIV 58
>05_04_0242 +
19336663-19336789,19337071-19337290,19337392-19337437,
19337559-19337675
Length = 169
Score = 26.6 bits (56), Expect = 7.2
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +3
Query: 75 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 254
PIY P G + +IF+ L G + S TG+ +S P +M + ++ + +
Sbjct: 54 PIYFPI-GNLATGFFVIFALLAGVVGVSTSLTGLHDVSQGYPASMMSAAAASIVTWTLTL 112
Query: 255 YGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSG-LAAGFAIGI 395
+ +A P + + F + AG + +G L AG + I
Sbjct: 113 LAMGLACKEISIGWRPPSLRALETFTIILAGTQLLCAGSLHAGAHVAI 160
>11_06_0478 + 24073295-24074172,24074790-24075090
Length = 392
Score = 26.2 bits (55), Expect = 9.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 338 GCWFGCRILWSGCRFRH 388
G W GC +LW G + H
Sbjct: 269 GPWQGCSVLWQGALYVH 285
>11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075
Length = 479
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 266 RGCPDCWCPPGASQLPPLQRVHPLGC 343
R CW G PP Q+ HP+ C
Sbjct: 10 RATVKCWDELGVCSSPPSQQQHPVVC 35
>05_03_0507 + 14814761-14815272,14816215-14816346,14817391-14817403
Length = 218
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 87 PFFGVMGAASAIIFSALGAAYGTAKSGT 170
PF G G A+ F A AYG A +GT
Sbjct: 102 PFLGGGGGATTAAFRAPSDAYGGAGAGT 129
>03_02_0168 +
6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 239 GYYCHLRSGRGCPDCWCPPGASQLPPL 319
GYY +G+ D WC PGAS P +
Sbjct: 455 GYYVKDATGKDF-DGWCWPGASSYPDM 480
>02_01_0468 + 3357043-3357226,3357695-3358155
Length = 214
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 282 AGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
AG PAN G GAGL V SGLA I
Sbjct: 170 AGTNSSPANGGAAGGGAKSGAGLTVAASGLAGSLIAAI 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,807,383
Number of Sequences: 37544
Number of extensions: 294958
Number of successful extensions: 1145
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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