Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31278
(396 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 145 1e-35
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 145 1e-35
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 145 1e-35
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 145 1e-35
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 137 3e-33
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 137 3e-33
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 54 5e-08
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 54 5e-08
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.056
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.13
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.13
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 1.6
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 1.6
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 1.6
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 1.6
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 2.1
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 2.8
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 2.8
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 28 2.8
Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical pr... 27 4.9
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 26 8.5
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 26 8.5
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 26 8.5
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 26 8.5
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 26 8.5
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 26 8.5
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 26 8.5
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 145 bits (351), Expect = 1e-35
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +3
Query: 81 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 260
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 261 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 93 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 272
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 273 VLI 281
+++
Sbjct: 156 LIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 145 bits (351), Expect = 1e-35
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +3
Query: 81 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 260
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 261 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 93 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 272
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 273 VLI 281
+++
Sbjct: 156 LIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 145 bits (351), Expect = 1e-35
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +3
Query: 81 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 260
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 261 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 93 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 272
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 273 VLI 281
+++
Sbjct: 156 LIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 145 bits (351), Expect = 1e-35
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +3
Query: 81 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 260
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 261 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGI
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 93 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 272
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 273 VLI 281
+++
Sbjct: 156 LIL 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 137 bits (331), Expect = 3e-33
Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Frame = +3
Query: 78 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 257
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 258 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGI 126
Score = 34.7 bits (76), Expect = 0.024
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 135 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 290
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 137 bits (331), Expect = 3e-33
Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Frame = +3
Query: 78 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 257
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 258 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGI 395
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGI 126
Score = 34.7 bits (76), Expect = 0.024
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 135 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 290
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 53.6 bits (123), Expect = 5e-08
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +3
Query: 102 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 281
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 282 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIGI 395
G L E + P L G++ G GL VG S L G A+GI
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGI 165
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 53.6 bits (123), Expect = 5e-08
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = +3
Query: 102 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 281
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 282 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIGI 395
G L E + P L G++ G GL VG S L G A+GI
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGI 165
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.056
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 215 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 298
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.13
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 314 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 216
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.13
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 314 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 216
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 245 YCHLRSGRGCPDCWCPPGASQ 307
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 227 CRHGGYYCHLRSGRGCPDCWCPPGASQ 307
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 245 YCHLRSGRGCPDCWCPPGASQ 307
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 245 YCHLRSGRGCPDCWCPPGASQ 307
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 374 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 198
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 197 PH 192
H
Sbjct: 82 DH 83
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 195 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 320
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +2
Query: 248 CHLRSGR-GCPDCWCPPGASQLPP 316
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 227 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 352
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 227 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 352
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Frame = +1
Query: 1 VQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPMELP 159
V ++ F TC + + T + +QS ++ W R +L +PW L M++P
Sbjct: 286 VPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRMKMP 345
Query: 160 SQE 168
+E
Sbjct: 346 DRE 348
>Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical
protein W02A2.8 protein.
Length = 130
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Frame = +2
Query: 206 DHEVDHSCRHGGY-YCHLR-----SGRGCPDCWCPPGA 301
DH+VD + YCHLR + R CPD W GA
Sbjct: 42 DHDVDRTIYDIPLEYCHLRIPKSRTSRSCPDPWRRYGA 79
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 335 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHR 186
+ P K G L+ N+ + Q +DG DDRN + D+L HR
Sbjct: 676 LQNPNAKSHSGPSLDHLKNKTT--QRIDGQRFDPDDRNAKKADRLNSQHR 723
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 356 YSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDG 249
Y TS D+ VKG+V W ++ N ++D V+G
Sbjct: 85 YVTTSGDGDDLIVKGIVKWKVQ-LKNWSTNDTVVEG 119
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIP 227
+A ++I SA +AY +GT M + P + M S++P
Sbjct: 482 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 521
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIP 227
+A ++I SA +AY +GT M + P + M S++P
Sbjct: 508 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 547
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIP 227
+A ++I SA +AY +GT M + P + M S++P
Sbjct: 482 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 521
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIP 227
+A ++I SA +AY +GT M + P + M S++P
Sbjct: 508 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 547
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIP 227
+A ++I SA +AY +GT M + P + M S++P
Sbjct: 349 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 388
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIP 227
+A ++I SA +AY +GT M + P + M S++P
Sbjct: 482 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 521
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 26.2 bits (55), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 108 AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIP 227
+A ++I SA +AY +GT M + P + M S++P
Sbjct: 508 SAPSVINSAANSAYYRKLNGTSTPIMGRVPPHVEMTSLLP 547
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,148,590
Number of Sequences: 27780
Number of extensions: 219887
Number of successful extensions: 742
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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