Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31277
         (303 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    51   2e-07
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    29   0.85 
U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical pr...    28   1.5  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   2.0  
CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical ...    27   2.0  
U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical pr...    26   4.5  
U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    26   4.5  
AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical ...    26   6.0  
AF016449-3|AAG23997.2|  337|Caenorhabditis elegans Serpentine re...    26   6.0  
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    25   7.9  
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    25   7.9  
U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine rece...    25   7.9  
U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine rece...    25   7.9  

>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 50.8 bits (116), Expect = 2e-07
 Identities = 22/50 (44%), Positives = 36/50 (72%)
 Frame = +1

Query: 154 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVT 303
           Q+V+ ++ + +P      YK  +L+T+G  Q+L+D++GK+YLD FGGIVT
Sbjct: 2   QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVT 50


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 103 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 219
           K+ P  + P+   G  YQQ++Q      PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239


>U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical
           protein T10E10.3 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 177 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 49
           SFH   L   R+R R     R R    + RSDDV A   S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 26  QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 160
           ++R  S+     ++ + ++S R  R K RRR    DR+RD R  K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504


>CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical
           protein C42C1.1 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 155 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 42
           W+ G + G+G  + GG+LA  L ++  S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173


>U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical
           protein T01B11.2b protein.
          Length = 160

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGI 297
           P ++++  MQ+LYD    ++LD    +
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNV 76


>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGI 297
           P ++++  MQ+LYD    ++LD    +
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNV 76


>AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical
           protein Y37H9A.3 protein.
          Length = 792

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 186 HVNSFHLFYLLVRRSRVRSGHEIRRRHFGRAV 91
           H+   H++Y+   +S  ++G   + R + RAV
Sbjct: 138 HLKQLHVYYMKAHKSAEQAGEGPKARRYKRAV 169


>AF016449-3|AAG23997.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein15 protein.
          Length = 337

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 208 YKKPVLLTQGHMQWLYD-NDGK 270
           + KPV+   G+M W++D N GK
Sbjct: 184 FTKPVIYNTGYMTWVFDPNIGK 205


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +2

Query: 29  QRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTP 208
           +R+ S+    E+    + S+ + R K  RR      +     +  ++   ++ R +SRTP
Sbjct: 226 RRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRTP 285

Query: 209 IRSR 220
            RSR
Sbjct: 286 QRSR 289


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +2

Query: 29  QRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTP 208
           +R+ S+    E+    + S+ + R K  RR      +     +  ++   ++ R +SRTP
Sbjct: 226 RRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRTP 285

Query: 209 IRSR 220
            RSR
Sbjct: 286 QRSR 289


>U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine
           receptor, class t protein19 protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 214 KPVLLTQGHMQWLYD 258
           KPV+ T  HM W +D
Sbjct: 181 KPVIFTPTHMSWFFD 195


>U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine
           receptor, class t protein20 protein.
          Length = 336

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 214 KPVLLTQGHMQWLYD 258
           KPV+ T  HM W +D
Sbjct: 181 KPVIFTPTHMSWFFD 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,036,484
Number of Sequences: 27780
Number of extensions: 170397
Number of successful extensions: 601
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)