Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31265
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1... 31 3.5
BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1... 31 3.5
AK056430-1|BAB71181.1| 658|Homo sapiens protein ( Homo sapiens ... 31 3.5
AC074378-1|AAY41024.1| 658|Homo sapiens unknown protein. 31 3.5
AB075846-1|BAB85552.1| 480|Homo sapiens KIAA1966 protein protein. 31 3.5
U04209-1|AAA92786.1| 439|Homo sapiens associated microfibrillar... 30 6.1
BC050742-1|AAH50742.1| 439|Homo sapiens microfibrillar-associat... 30 6.1
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 30 6.1
BC023557-1|AAH23557.1| 439|Homo sapiens microfibrillar-associat... 30 6.1
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 30 6.1
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 30 6.1
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 30 6.1
AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein. 30 8.1
AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein. 30 8.1
>BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1
protein.
Length = 709
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 596 RDRAVLTG-RAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKEYDGK 426
R +AV++G R+ PR E R++DR +R ERD R + E E ER DR G+
Sbjct: 648 RTQAVVSGRRSRPRERDRE-RERDRPRDNRRDRERDRGR-DRERERERLCDRDRDRGE 703
>BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1
protein.
Length = 727
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 596 RDRAVLTG-RAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKEYDGK 426
R +AV++G R+ PR E R++DR +R ERD R + E E ER DR G+
Sbjct: 666 RTQAVVSGRRSRPRERDRE-RERDRPRDNRRDRERDRGR-DRERERERLCDRDRDRGE 721
>AK056430-1|BAB71181.1| 658|Homo sapiens protein ( Homo sapiens
cDNA FLJ31868 fis, clone NT2RP7001962, highly similar to
Rattus norvegicus YT521 mRNA for RNA splicing-related
protein. ).
Length = 658
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 596 RDRAVLTG-RAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKEYDGK 426
R +AV++G R+ PR E R++DR +R ERD R + E E ER DR G+
Sbjct: 597 RTQAVVSGRRSRPRERDRE-RERDRPRDNRRDRERDRGR-DRERERERLCDRDRDRGE 652
>AC074378-1|AAY41024.1| 658|Homo sapiens unknown protein.
Length = 658
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 596 RDRAVLTG-RAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKEYDGK 426
R +AV++G R+ PR E R++DR +R ERD R + E E ER DR G+
Sbjct: 597 RTQAVVSGRRSRPRERDRE-RERDRPRDNRRDRERDRGR-DRERERERLCDRDRDRGE 652
>AB075846-1|BAB85552.1| 480|Homo sapiens KIAA1966 protein protein.
Length = 480
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -3
Query: 596 RDRAVLTG-RAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKEYDGK 426
R +AV++G R+ PR E R++DR +R ERD R + E E ER DR G+
Sbjct: 419 RTQAVVSGRRSRPRERDRE-RERDRPRDNRRDRERDRGR-DRERERERLCDRDRDRGE 474
>U04209-1|AAA92786.1| 439|Homo sapiens associated microfibrillar
protein protein.
Length = 439
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 608 EDDIRDRAVLTGRAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKE 438
E++I D + R + R + ER++++ + R SE E E E Y D ++
Sbjct: 137 EEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSED 193
>BC050742-1|AAH50742.1| 439|Homo sapiens microfibrillar-associated
protein 1 protein.
Length = 439
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 608 EDDIRDRAVLTGRAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKE 438
E++I D + R + R + ER++++ + R SE E E E Y D ++
Sbjct: 137 EEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSED 193
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 472 NMKKKDTSIGKNTTENGRMETNQKETPNKKKRPQKNLKSNPSIL 341
NMKKK K + E+ +E NQ++T +K+K L+S P I+
Sbjct: 279 NMKKKV----KLSKEHQSLEENQRQTRSKRKATSDTLESPPKII 318
>BC023557-1|AAH23557.1| 439|Homo sapiens microfibrillar-associated
protein 1 protein.
Length = 439
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 608 EDDIRDRAVLTGRAVPRSYSPERRDKDRDSYSRFSAERDSHRSEGEYEEERYVDRKE 438
E++I D + R + R + ER++++ + R SE E E E Y D ++
Sbjct: 137 EEEIDDEEIERRRGMMRQRAQERKNEEMEVMEVEDEGRSGEESESESEYEEYTDSED 193
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 472 NMKKKDTSIGKNTTENGRMETNQKETPNKKKRPQKNLKSNPSIL 341
NMKKK K + E+ +E NQ++T +K+K L+S P I+
Sbjct: 279 NMKKKV----KLSKEHQSLEENQRQTRSKRKATSDTLESPPKII 318
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 472 NMKKKDTSIGKNTTENGRMETNQKETPNKKKRPQKNLKSNPSIL 341
NMKKK K + E+ +E NQ++T +K+K L+S P I+
Sbjct: 80 NMKKKV----KLSKEHQSLEENQRQTRSKRKATSDTLESPPKII 119
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 472 NMKKKDTSIGKNTTENGRMETNQKETPNKKKRPQKNLKSNPSIL 341
NMKKK K + E+ +E NQ++T +K+K L+S P I+
Sbjct: 279 NMKKKV----KLSKEHQSLEENQRQTRSKRKATSDTLESPPKII 318
>AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 29.9 bits (64), Expect = 8.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 548 PERRDKDRDSYSRFSAERDSHRSEGEYEE-ERYVDRKEYDGKWADGNEPERNTQ 390
PER+D+D +RDSH S+ E ++ + + ++ E K ++ ER +Q
Sbjct: 149 PERQDRDSHHGQSEKQDRDSHHSQPERQDRDSHHNQSERQDKDFSFDQSERQSQ 202
>AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 29.9 bits (64), Expect = 8.1
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 548 PERRDKDRDSYSRFSAERDSHRSEGEYEE-ERYVDRKEYDGKWADGNEPERNTQ 390
PER+D+D +RDSH S+ E ++ + + ++ E K ++ ER +Q
Sbjct: 149 PERQDRDSHHGQSEKQDRDSHHSQPERQDRDSHHNQSERQDKDFSFDQSERQSQ 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,405,583
Number of Sequences: 237096
Number of extensions: 1483283
Number of successful extensions: 8605
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8552
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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