Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31264
(368 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 64 2e-11
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 32 0.15
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 32 0.15
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 32 0.15
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 27 3.2
Z99286-1|CAH60792.1| 311|Caenorhabditis elegans Hypothetical pr... 27 5.5
X59156-7|CAB56745.1| 104|Caenorhabditis elegans transposase pro... 27 5.5
Z78420-5|CAI79244.1| 295|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z78420-4|CAB01709.1| 298|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical pr... 26 7.3
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 26 7.3
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 26 7.3
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 26 7.3
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 26 7.3
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 26 7.3
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 26 9.7
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 26 9.7
AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical ... 26 9.7
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 2/45 (4%)
Frame = +3
Query: 240 MRYYSS--LPSHIKVNLXALSPTMESGSIVSWEKKEGDKLSEGDL 368
+R YSS LP H +V L ALSPTME G++VSW+KKEGD+LSEGDL
Sbjct: 66 VRLYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDL 110
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 99 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKV 278
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 23 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 80
Query: 279 NLXALSPTMESGSIVSWE 332
N +S T+ + +++ E
Sbjct: 81 NPEQISSTLSTDGVLTVE 98
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 99 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKV 278
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 177
Query: 279 NLXALSPTMESGSIVSWE 332
N +S T+ + +++ E
Sbjct: 178 NPEQISSTLSTDGVLTVE 195
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 99 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKV 278
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 191
Query: 279 NLXALSPTMESGSIVSWE 332
N +S T+ + +++ E
Sbjct: 192 NPEQISSTLSTDGVLTVE 209
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 176 RNFPFCQFCTNAPRNVRPYSFLKT 105
+NF FC C++AP V+P + T
Sbjct: 503 KNFIFCGMCSSAPVKVKPNRAINT 526
>Z99286-1|CAH60792.1| 311|Caenorhabditis elegans Hypothetical
protein Y7A9C.7 protein.
Length = 311
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -2
Query: 217 DRTVWFCACSNNLFVTFLFASSVLMHLVMFDRIAFLRPSLKI*FRNTIVRNIINIFY 47
D T WF N+ F +F SS+LM +V+F A++ + + T++ +N FY
Sbjct: 15 DLTDWF---QNSYFA--VFTSSILMSVVLFPLYAYVFKMNRKHDQETLLFPAVNHFY 66
>X59156-7|CAB56745.1| 104|Caenorhabditis elegans transposase
protein.
Length = 104
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 54 ILIMLRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHA 197
IL++ + +++D L K IR +T C S+ + T++LLE A
Sbjct: 50 ILVLESHFFHKKNVINDFLGKFIRLFLTSCSSSSCTEVVPTHELLEPA 97
>Z78420-5|CAI79244.1| 295|Caenorhabditis elegans Hypothetical
protein F45H11.1b protein.
Length = 295
Score = 26.2 bits (55), Expect = 7.3
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 78 VLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVXMRYYSS 257
V +N + S L + S+++ S A + L +Q +T+ + Q T M SS
Sbjct: 131 VYQNYLASSQLGGLLSSSVSAVASQLPAGINAQSALNITSQQRTIAKSFQHTKPMASSSS 190
Query: 258 LPSHIKVNLXALSPTMESGS 317
+PS + + + + + SGS
Sbjct: 191 IPSVLTASNSSANSLVSSGS 210
>Z78420-4|CAB01709.1| 298|Caenorhabditis elegans Hypothetical
protein F45H11.1a protein.
Length = 298
Score = 26.2 bits (55), Expect = 7.3
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 78 VLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVXMRYYSS 257
V +N + S L + S+++ S A + L +Q +T+ + Q T M SS
Sbjct: 131 VYQNYLASSQLGGLLSSSVSAVASQLPAGINAQSALNITSQQRTIAKSFQHTKPMASSSS 190
Query: 258 LPSHIKVNLXALSPTMESGS 317
+PS + + + + + SGS
Sbjct: 191 IPSVLTASNSSANSLVSSGS 210
>Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical
protein F13B12.3 protein.
Length = 717
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 135 TRCISTELAKRKVTNKLLEHAQNQTVLST 221
+RC S +++ R++ NKL E Q + + T
Sbjct: 32 SRCTSVDMSSREIINKLNEMEQEEKLFIT 60
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 56 IDNVANNCVTESNLKRWS*ESYTVEHYEVH*YRTGKKESYE 178
+D NN + E L R+ Y+ EH+ + +ESYE
Sbjct: 532 VDAKVNNAIRECVLNRFVEMFYSYEHFVIGGQGCDDRESYE 572
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 51 KILIMLRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTV 212
K+L +TI+ +I DGL++ + + C+ ++ V K + +NQT+
Sbjct: 280 KVLKSRKTILCVKEISIDGLEECQMAEMLSCVKPRTLEKIVLQK--NYDENQTI 331
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 26.2 bits (55), Expect = 7.3
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +3
Query: 309 SGSIVSWEKKEGDKLSEGDL 368
+G ++ W+K++GD L+ GD+
Sbjct: 694 TGKLLQWKKEDGDWLNVGDV 713
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 26.2 bits (55), Expect = 7.3
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +3
Query: 309 SGSIVSWEKKEGDKLSEGDL 368
+G ++ W+K++GD L+ GD+
Sbjct: 694 TGKLLQWKKEDGDWLNVGDV 713
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 81 LRNQILSDGLKKAIRSNITRCISTE----LAKRKVTNKLLEHAQNQ 206
+ N I+ DG++ +++T CI + AK KV N+++E +++
Sbjct: 354 ISNSIICDGVEIGENADVTNCIVAKDQKVPAKGKVQNEVVEDGEDE 399
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 47 VKNIDNVANNCVTESNLKRWS*ESYTVEHYEVH 145
+KN+ +ANNC TE + W+ + +E+ EVH
Sbjct: 655 LKNLYTIANNC-TEDAI-TWT-HQFMIENLEVH 684
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +3
Query: 150 TELAKRKVTNKLLEHAQNQTVLSTPQWTVXMRYYSSLPSHIKVNLXALSPTMESGSIVSW 329
T L++ T L ++ L + R S LP H + L ++ SI SW
Sbjct: 221 TPLSRASSTQSLASGSEQSFNLGNVPDKILRRVISFLPIHETIRLERVNKKFMEESIKSW 280
Query: 330 E 332
E
Sbjct: 281 E 281
>AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical
protein F41B5.9 protein.
Length = 502
Score = 25.8 bits (54), Expect = 9.7
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 204 QTVLSTPQWTVXMRYYSSLPSHIKVNL 284
Q +LST +W + ++SLP+++++ +
Sbjct: 222 QEMLSTAEWLTNFQEFNSLPTNVQLEV 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,245,058
Number of Sequences: 27780
Number of extensions: 155815
Number of successful extensions: 405
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -