Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31263
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   2.2  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    21   3.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   5.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    20   8.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 111  ITLPPGTPVLAVVGATTTSPL 173
            + +PP  PVL V  +T++S L
Sbjct: 1401 VQVPPSAPVLYVTSSTSSSIL 1421


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 111  ITLPPGTPVLAVVGATTTSPL 173
            + +PP  PVL V  +T++S L
Sbjct: 1397 VQVPPSAPVLYVTSSTSSSIL 1417


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 174 REGWWSWRRRPPVPASRGG 118
           R+ WWS  R P    S+ G
Sbjct: 42  RKRWWSRPREPAQTTSKAG 60


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 93  RSTXSPITLPPGTP 134
           RS   P+  PPG P
Sbjct: 43  RSNRGPVLFPPGPP 56


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 277 AFHHPDAHCSCIKRVQSSL 333
           ++H P+AH S  +++Q  +
Sbjct: 155 SWHSPEAHISVAQKLQKEI 173


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 116  PPPRDAGTGGRRRHDHQPSRSAGYPKPA 199
            P P +A  G  +      S+ A  PKPA
Sbjct: 1000 PQPANAQQGQAQAQAKPQSQEANKPKPA 1027


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 310 IKRVQSSLHVVFLGPLRRSP 369
           ++  QS LH+    P  RSP
Sbjct: 664 VQHTQSQLHLHLTSPPARSP 683


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 106 LPSPSPPGRRYWRSSAPR 159
           +P P PP  R  R + P+
Sbjct: 50  IPQPRPPHPRLRREAEPK 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,306
Number of Sequences: 438
Number of extensions: 3076
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)