Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31259
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 51 8e-07
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.29
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.29
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL034488-8|CAE46690.1| 395|Caenorhabditis elegans Hypothetical ... 28 6.3
AL034488-7|CAA22452.1| 396|Caenorhabditis elegans Hypothetical ... 28 6.3
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 335 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 511
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 512 TQTKGWLNSIIFIGMMVGAYAWG 580
+ + + + +F GMM+ + WG
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWG 140
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 335 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 511
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 512 TQTKGWLNSIIFIGMMVGAYAWG 580
+ + + + +F GMM+ + WG
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWG 140
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.29
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 396 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 217
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 216 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 118
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.29
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 396 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 217
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 216 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 118
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.29
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 396 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 217
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 216 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 118
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/64 (20%), Positives = 31/64 (48%)
Frame = +2
Query: 398 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 577
R Y+ + + +V+ +D +++ +LP Q ++ G + ++ I M+G+
Sbjct: 5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64
Query: 578 GFSG 589
G+ G
Sbjct: 65 GYLG 68
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 371 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 532
R EL G G +A CGL STS E+ V+ F L ++ Q + L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241
>AL034488-8|CAE46690.1| 395|Caenorhabditis elegans Hypothetical
protein Y54G11A.8b protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 472 VHPTLGTVRLRPHHSD*RMAKQYNLHRYDGGRVRLGVQW 588
V T R HHS R +Q++ H GG+ G +W
Sbjct: 16 VAAAFSTGTTRQHHSSGRSRQQHHRHGGSGGKTNGGGRW 54
>AL034488-7|CAA22452.1| 396|Caenorhabditis elegans Hypothetical
protein Y54G11A.8a protein.
Length = 396
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 472 VHPTLGTVRLRPHHSD*RMAKQYNLHRYDGGRVRLGVQW 588
V T R HHS R +Q++ H GG+ G +W
Sbjct: 16 VAAAFSTGTTRQHHSSGRSRQQHHRHGGSGGKTNGGGRW 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,526,543
Number of Sequences: 27780
Number of extensions: 339532
Number of successful extensions: 910
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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