Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31256
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679... 184 7e-47
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626... 183 1e-46
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 31 1.0
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 31 1.0
11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 30 1.3
05_03_0369 - 13136146-13136175,13136237-13136908,13136926-131370... 29 2.4
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 28 5.4
03_02_0922 - 12417328-12417816,12417929-12418399,12418568-124186... 28 5.4
05_04_0084 - 17788077-17789240 28 7.2
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 28 7.2
02_01_0475 + 3422629-3422695,3422960-3423216 28 7.2
06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089 27 9.5
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 27 9.5
>01_06_1660 +
38966999-38967001,38967685-38967757,38967841-38967923,
38968042-38968168,38968260-38968339,38968428-38968544,
38968711-38968845,38969046-38969215,38969300-38969417
Length = 301
Score = 184 bits (447), Expect = 7e-47
Identities = 88/177 (49%), Positives = 123/177 (69%)
Frame = -1
Query: 611 YTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIK 432
Y G + TG++Y VEP D FR LDVGL RTTTG RVFGA+KGA+DGGL++PHS K
Sbjct: 117 YEGNIEATGEDYYVEPADERR-PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDK 175
Query: 431 RFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSXEQDDEDSFKXQFSKYIKXGVTADAIEA 252
RF G+ + K+ ++++HR +I+G HVA+YMRS +++ + F+ FS+Y+K G+ AD +EA
Sbjct: 176 RFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEA 235
Query: 251 IYKKAHEAIRADPSPKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 81
+YKK H AIRADP+ K KK+ KR+N +KLT +Q+KAS ++RL A
Sbjct: 236 LYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT-------YEQRKASLVERLNA 284
>01_06_1659 +
38961637-38961639,38962361-38962433,38962531-38962613,
38962732-38962858,38962950-38963029,38963112-38963228,
38963393-38963527,38963714-38963883,38963970-38964087
Length = 301
Score = 183 bits (445), Expect = 1e-46
Identities = 87/177 (49%), Positives = 123/177 (69%)
Frame = -1
Query: 611 YTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIK 432
Y G + TG++Y VEP D FR LDVGL RTTTG RVFGA+KGA+DGGL++PHS K
Sbjct: 117 YEGNVEATGEDYYVEPADERR-PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDK 175
Query: 431 RFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSXEQDDEDSFKXQFSKYIKXGVTADAIEA 252
RF G+ + K+ ++++HR +I+G HVA+YMRS +++ + F+ FS+Y+K G+ AD +E+
Sbjct: 176 RFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMES 235
Query: 251 IYKKAHEAIRADPSPKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 81
+YKK H AIRADP+ K KK+ KR+N +KLT +Q+KAS ++RL A
Sbjct: 236 LYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT-------YEQRKASLVERLNA 284
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 206 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 108
KKK+ KK K+K+ NK+K ++K + K+KK
Sbjct: 74 KKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 251 IYKKAHEAIRADPSPKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 96
+ KK + + KKK+ KK + K+K+ K+K ++K R KA I
Sbjct: 66 VMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNKAQHI 117
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -1
Query: 206 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 90
KKK+ KK K+K+ K+K ++K + K+KK KR
Sbjct: 70 KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108
>02_01_0598 +
4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1
Query: 278 GVTADAIEAIYKKAHEAIRADPSPKKKELKKDSVKQKRWNK 156
G++ A+EA YK+++E+ A+P P KK + +W++
Sbjct: 749 GLSHYAMEAGYKRSNESTPAEPVPSKKPKVDPVLPASKWSR 789
>11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415
Length = 126
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = -1
Query: 260 IEAIYKKAHEAIRADPSPKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 108
+E KKA ++ PKKK+ KK K+K+ K+K E ++ ++Q+K
Sbjct: 40 LELRKKKAKAKVKK--KPKKKKNKKAKKKKKKKKKKKKEEEEEESDVRQQK 88
>05_03_0369 -
13136146-13136175,13136237-13136908,13136926-13137016,
13137184-13137416,13137459-13137731,13137877-13138265,
13138325-13139156,13139847-13139922,13140027-13140414,
13141395-13141748,13142069-13142333,13143366-13143716
Length = 1317
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 233 EAIRADPSPKKKELKKDSVKQKR-WNKRKLTLAERKNRIKQKKASFIKRLQ 84
E RADP P+ EL +SV R +KR + A ++KK SFI +Q
Sbjct: 165 EQHRADPRPQLPELTDESVIIGRSEDKRNIIAALLTRGSEEKKESFISDIQ 215
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Frame = -1
Query: 356 VAEYMRSXEQD--DEDSFKXQFSKYIKXGVTA--DAIEAIYKKAHEAIRADPSPKKKELK 189
V E +R +D + + K + + ++ G+ D ++A +K E + K ++ +
Sbjct: 167 VEESIRKNVEDRLNSEDIKNEIKRRVEEGIKQLFDEVDAQLQKEKETALREARHKAEQER 226
Query: 188 KDSVKQKRW---NKRKLTLAERKNRIKQKKASF-----IKRLQAQAE 72
++ + R N+RK+ A+RK ++Q++ ++R+Q Q E
Sbjct: 227 REREELDRMLEENRRKVEEAQRKEALEQQQKELERFLELERIQKQRE 273
>03_02_0922 -
12417328-12417816,12417929-12418399,12418568-12418663,
12418746-12418927,12419027-12419486
Length = 565
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -1
Query: 278 GVTADAIEAIYKKAHEAIRADPSPKKKELKK--DSVKQKRWNKRKLTLAERK 129
GV A+ + +EA+ P+KK+ KK + + +RW ++K +RK
Sbjct: 504 GVPEKAMRKLVLAQNEAVILPSWPEKKKKKKWEEEPEDERWEEKKKAAKQRK 555
>05_04_0084 - 17788077-17789240
Length = 387
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -1
Query: 245 KKAHEAIRADPSPKKKELKKDSVKQKR----WNKRKLTLAERKNRIKQKKASFIK 93
+ A E + DP K+ +KKD +Q++ W +R+ + ++K + K+ I+
Sbjct: 300 RAAGEKVHDDPKLIKESMKKDKKRQQKHAEQWKERQKMVDKQKKERQSKRTENIR 354
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 213 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKE 109
+P E+ V ER + E LE + I EEK+ + +E
Sbjct: 518 LPSEDSVSERRRKLEFLEMQEELIKEEEKKKEKEE 552
>02_01_0475 + 3422629-3422695,3422960-3423216
Length = 107
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -1
Query: 260 IEAIYKKAHEAIRADPSPKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 81
++ + + A+ + KKK+ KK K+K+ K+K ++K + K K +S + L A
Sbjct: 26 VQVVLQLAYTIFGFEEGKKKKKKKKKKKKKKK--KKKKKKKKKKKKKKNKLSSAVTNLGA 83
>06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089
Length = 681
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 170 KRWNKRKLTLAERKNRIKQKK 108
+RW K KL+ +ERK R ++ K
Sbjct: 229 ERWKKEKLSKSERKRRAREAK 249
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 188 KDSVKQKRWNKRKLTLAERKNRIKQKKASFI 96
KD KQK + K +L L ERK + K+ F+
Sbjct: 142 KDERKQKVFYKNQLELEERKKKALDKQLDFL 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,369,144
Number of Sequences: 37544
Number of extensions: 292893
Number of successful extensions: 994
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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