Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31254
         (589 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p pro...   144   1e-34
AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA...   144   1e-34
BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p pro...    29   4.7  
M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me...    29   6.2  
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro...    29   6.2  
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ...    29   6.2  

>AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p
           protein.
          Length = 318

 Score =  144 bits (348), Expect = 1e-34
 Identities = 68/130 (52%), Positives = 84/130 (64%)
 Frame = +2

Query: 200 ESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQG 379
           E S LA LRKKTGYT ANCKKALE HNND   AE WLHEQAQ +GW+KATK+A R    G
Sbjct: 28  EKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHG 87

Query: 380 LVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELD 559
           L+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++        G + K+  D
Sbjct: 88  LIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDL-TDFDGDLWKLGFD 146

Query: 560 SEQLGTLHAE 589
           ++ L  L  E
Sbjct: 147 ADALRNLRTE 156


>AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA
           protein.
          Length = 318

 Score =  144 bits (348), Expect = 1e-34
 Identities = 68/130 (52%), Positives = 84/130 (64%)
 Frame = +2

Query: 200 ESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQG 379
           E S LA LRKKTGYT ANCKKALE HNND   AE WLHEQAQ +GW+KATK+A R    G
Sbjct: 28  EKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAHG 87

Query: 380 LVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELD 559
           L+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++        G + K+  D
Sbjct: 88  LIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDL-TDFDGDLWKLGFD 146

Query: 560 SEQLGTLHAE 589
           ++ L  L  E
Sbjct: 147 ADALRNLRTE 156


>BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p
           protein.
          Length = 1017

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +2

Query: 176 TSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAM 331
           TSP    + S +   ++KK+  TIA  +KAL   + +AD     L  +A+++
Sbjct: 718 TSPLSNRSNSLIFGSIKKKSTLTIAESEKALLKADLEADMKYKQLIMEAESL 769


>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
           D.melanogaster alpha-spectrin mRNA, complete cds. ).
          Length = 2415

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +2

Query: 260 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 439
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 440 DFVAKNDKF-QKMIEDAAIAS 499
           + +   D   Q+MI     AS
Sbjct: 100 NAIVSLDNTGQEMINQQHFAS 120


>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p
           protein.
          Length = 1557

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +2

Query: 260 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 439
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 440 DFVAKNDKF-QKMIEDAAIAS 499
           + +   D   Q+MI     AS
Sbjct: 100 NAIVSLDNTGQEMINQQHFAS 120


>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
           protein.
          Length = 2415

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
 Frame = +2

Query: 260 KALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCET 439
           +  +    DAD+ E+W+HE+ QA   A        T LQ     K  K+     E++  +
Sbjct: 47  RRFQYFKRDADELESWIHEKLQA---ASEESYRDPTNLQ----AKIQKHQAFEAEVSAHS 99

Query: 440 DFVAKNDKF-QKMIEDAAIAS 499
           + +   D   Q+MI     AS
Sbjct: 100 NAIVSLDNTGQEMINQQHFAS 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,058,648
Number of Sequences: 53049
Number of extensions: 516900
Number of successful extensions: 1063
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)