Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31254
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78198-4|CAB01570.1| 316|Caenorhabditis elegans Hypothetical pr... 100 2e-21
D87850-1|BAA13470.1| 316|Caenorhabditis elegans elongation fact... 100 2e-21
CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical ... 32 0.35
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 2.4
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 2.4
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 2.4
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 2.4
AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi... 29 3.2
AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna ... 29 3.2
AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kina... 27 9.9
AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascul... 27 9.9
>Z78198-4|CAB01570.1| 316|Caenorhabditis elegans Hypothetical
protein F55C5.5 protein.
Length = 316
Score = 99.5 bits (237), Expect = 2e-21
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +2
Query: 191 KAAESSLLAKLRKKTGYTIANCKKAL-EMHNNDADKAETWLHEQAQAMGWAKATKLAGRT 367
K ++ +L+A LRKKTGY+ NC+KAL + ND D A WL E A GWAKA KL R
Sbjct: 24 KVSKEALMA-LRKKTGYSYVNCRKALIQFGENDMDSAVKWLKEAAAKEGWAKAAKLGTRV 82
Query: 368 ALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITK 547
GLV+V D + A+VEL+CETDFVA++ F+ ++ + I++ A K Q+ +K
Sbjct: 83 TSNGLVSVVTDNSTAAVVELSCETDFVARSGAFKDLLSN--ISNSVLAKAKPQSISSGSK 140
Query: 548 MELDSEQLGTL 580
++ + LG L
Sbjct: 141 LQEFTYDLGDL 151
>D87850-1|BAA13470.1| 316|Caenorhabditis elegans elongation factor
Ts homologue protein.
Length = 316
Score = 99.5 bits (237), Expect = 2e-21
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +2
Query: 191 KAAESSLLAKLRKKTGYTIANCKKAL-EMHNNDADKAETWLHEQAQAMGWAKATKLAGRT 367
K ++ +L+A LRKKTGY+ NC+KAL + ND D A WL E A GWAKA KL R
Sbjct: 24 KVSKEALMA-LRKKTGYSYVNCRKALIQFGENDMDSAVKWLKEAAAKEGWAKAAKLGTRV 82
Query: 368 ALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITK 547
GLV+V D + A+VEL+CETDFVA++ F+ ++ + I++ A K Q+ +K
Sbjct: 83 TSNGLVSVVTDNSTAAVVELSCETDFVARSGAFKDLLSN--ISNSVLAKAKPQSISSGSK 140
Query: 548 MELDSEQLGTL 580
++ + LG L
Sbjct: 141 LQEFTYDLGDL 151
>CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical
protein C50E10.5 protein.
Length = 361
Score = 31.9 bits (69), Expect = 0.35
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -2
Query: 429 LSSTRAPWFLSNLTATNPWRAVLPANLVAFAHPIA----WACSWSHVSALSASLLCISNA 262
L T A WF+ + T+ WR + A L+ F H I W C ++H++ ++C
Sbjct: 148 LERTFASWFILDYERTSRWR-IFRA-LLIFQHGIIFVMHWFCFFNHINFFLGFIVCF--L 203
Query: 261 FLQLAIV 241
F+ LA+V
Sbjct: 204 FIILAVV 210
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.1 bits (62), Expect = 2.4
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +2
Query: 218 KLRKKTGYTIANCKKALEMHNND-ADKAETWLHEQAQAMGWAKA-TKLAGRTALQGLVAV 391
+LRK+ G +N +KA M +ND D+ T +++ G KA KL G L+ +
Sbjct: 2249 ELRKELGELESNVEKASAMSSNDIGDQLATLDSLKSRFGGVDKALEKLKG--ILEATEEL 2306
Query: 392 KFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQL 571
+ D + A ++ ET K D+ ++ IE+ K A Q +G + +LD E +
Sbjct: 2307 EVDATNRAEIQEQLETT-QKKADELERKIENV-----KKAALNAQNEGLELEKKLD-ELI 2359
Query: 572 GTLHA 586
GT+++
Sbjct: 2360 GTVNS 2364
>AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi
enabling proteinSID-1 protein.
Length = 776
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -1
Query: 448 HKISFTVEFHQSTMVLVKLNSYQPLEGRPAS*FSCLCPSHCLGLFMEPCLSLICIIIM 275
H+ S ++ T++ V + + L+ ++ + +CPS F PC+ +IC ++M
Sbjct: 507 HEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH-ICPSDVAFQFDTPCIQVICGLLM 563
>AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna
interference defectiveprotein 1 protein.
Length = 776
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -1
Query: 448 HKISFTVEFHQSTMVLVKLNSYQPLEGRPAS*FSCLCPSHCLGLFMEPCLSLICIIIM 275
H+ S ++ T++ V + + L+ ++ + +CPS F PC+ +IC ++M
Sbjct: 507 HEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH-ICPSDVAFQFDTPCIQVICGLLM 563
>AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kinase
receptor T17A3.1 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -1
Query: 319 LFMEPCLSLICIIIMHF*CFLAISDCVARFFPEFSKQRRFSCFIRWTCMNSSNQLENHLI 140
LF+ L + +++HF FL I A P S + + CF+ W C +N I
Sbjct: 13 LFLPLFLKGMIFLLLHF-KFLVI---FALELPIISLRPKSDCFLFWKCTTDYRIQKNQKI 68
Query: 139 GHSVILS 119
G V L+
Sbjct: 69 GKFVELT 75
>AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 1
protein.
Length = 1083
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -1
Query: 319 LFMEPCLSLICIIIMHF*CFLAISDCVARFFPEFSKQRRFSCFIRWTCMNSSNQLENHLI 140
LF+ L + +++HF FL I A P S + + CF+ W C +N I
Sbjct: 13 LFLPLFLKGMIFLLLHF-KFLVI---FALELPIISLRPKSDCFLFWKCTTDYRIQKNQKI 68
Query: 139 GHSVILS 119
G V L+
Sbjct: 69 GKFVELT 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,988,538
Number of Sequences: 27780
Number of extensions: 271102
Number of successful extensions: 654
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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