BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31247
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L31801-1|AAC41707.1| 500|Homo sapiens monocarboxylate transport... 32 1.7
BC045664-1|AAH45664.1| 430|Homo sapiens SLC16A1 protein protein. 32 1.7
BC026317-1|AAH26317.1| 500|Homo sapiens solute carrier family 1... 32 1.7
AL158844-5|CAI21875.1| 296|Homo sapiens solute carrier family 1... 32 1.7
AL158844-4|CAI21874.1| 215|Homo sapiens solute carrier family 1... 32 1.7
AL158844-3|CAI21873.1| 456|Homo sapiens solute carrier family 1... 32 1.7
AL158844-2|CAI21872.1| 500|Homo sapiens solute carrier family 1... 32 1.7
AJ438945-1|CAD27707.1| 500|Homo sapiens monocarboxylate transpo... 32 1.7
BC030693-1|AAH30693.1| 478|Homo sapiens solute carrier family 1... 31 3.0
AF058056-1|AAC13721.1| 478|Homo sapiens monocarboxylate transpo... 31 3.0
BC142618-1|AAI42619.1| 426|Homo sapiens solute carrier family 1... 29 9.1
BC131739-1|AAI31740.1| 422|Homo sapiens SLC16A13 protein protein. 29 9.1
BC109286-1|AAI09287.1| 424|Homo sapiens SLC16A13 protein protein. 29 9.1
AF049608-1|AAC70919.1| 478|Homo sapiens monocarboxylate transpo... 29 9.1
>L31801-1|AAC41707.1| 500|Homo sapiens monocarboxylate transporter
1 protein.
Length = 500
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>BC045664-1|AAH45664.1| 430|Homo sapiens SLC16A1 protein protein.
Length = 430
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>BC026317-1|AAH26317.1| 500|Homo sapiens solute carrier family 16,
member 1 (monocarboxylic acid transporter 1) protein.
Length = 500
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>AL158844-5|CAI21875.1| 296|Homo sapiens solute carrier family 16,
member 1 (monocarboxylic acid transporter 1) protein.
Length = 296
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>AL158844-4|CAI21874.1| 215|Homo sapiens solute carrier family 16,
member 1 (monocarboxylic acid transporter 1) protein.
Length = 215
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>AL158844-3|CAI21873.1| 456|Homo sapiens solute carrier family 16,
member 1 (monocarboxylic acid transporter 1) protein.
Length = 456
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>AL158844-2|CAI21872.1| 500|Homo sapiens solute carrier family 16,
member 1 (monocarboxylic acid transporter 1) protein.
Length = 500
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>AJ438945-1|CAD27707.1| 500|Homo sapiens monocarboxylate
transporter isoform 1 protein.
Length = 500
Score = 31.9 bits (69), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+ + + A ++I S+
Sbjct: 13 PPDGGWGWAVVIGAFISIGFSY 34
>BC030693-1|AAH30693.1| 478|Homo sapiens solute carrier family 16,
member 7 (monocarboxylic acid transporter 2) protein.
Length = 478
Score = 31.1 bits (67), Expect = 3.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+++ +A ++I S+
Sbjct: 13 PPDGGWGWIVVGAAFISIGFSY 34
>AF058056-1|AAC13721.1| 478|Homo sapiens monocarboxylate
transporter 2 protein.
Length = 478
Score = 31.1 bits (67), Expect = 3.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+++ +A ++I S+
Sbjct: 13 PPDGGWGWIVVGAAFISIGFSY 34
>BC142618-1|AAI42619.1| 426|Homo sapiens solute carrier family 16,
member 13 (monocarboxylic acid transporter 13) protein.
Length = 426
Score = 29.5 bits (63), Expect = 9.1
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 66 PPDGGWGYLICVSA 107
PPDGGWG+++ +SA
Sbjct: 7 PPDGGWGWVVVLSA 20
>BC131739-1|AAI31740.1| 422|Homo sapiens SLC16A13 protein protein.
Length = 422
Score = 29.5 bits (63), Expect = 9.1
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 66 PPDGGWGYLICVSA 107
PPDGGWG+++ +SA
Sbjct: 5 PPDGGWGWVVVLSA 18
>BC109286-1|AAI09287.1| 424|Homo sapiens SLC16A13 protein protein.
Length = 424
Score = 29.5 bits (63), Expect = 9.1
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 66 PPDGGWGYLICVSA 107
PPDGGWG+++ +SA
Sbjct: 5 PPDGGWGWVVVLSA 18
>AF049608-1|AAC70919.1| 478|Homo sapiens monocarboxylate
transporter 2 protein.
Length = 478
Score = 29.5 bits (63), Expect = 9.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 66 PPDGGWGYLICVSAIVNIVSSF 131
PPDGGWG+++ + ++I S+
Sbjct: 13 PPDGGWGWIVVGATFISIGFSY 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,925,481
Number of Sequences: 237096
Number of extensions: 1853335
Number of successful extensions: 3885
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3885
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -