Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31246
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical... 42 2e-04
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.074
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.13
Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical p... 31 0.30
U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical pr... 29 0.91
Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical p... 28 2.1
Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical p... 28 2.1
Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 27 3.7
Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical p... 27 3.7
Z68161-8|CAH60763.1| 625|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical pr... 27 3.7
AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribo... 27 3.7
AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribo... 27 3.7
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 27 3.7
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 27 3.7
Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical p... 27 4.9
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 4.9
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 4.9
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 4.9
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 4.9
Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical pr... 26 6.4
>Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +1
Query: 130 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 309
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 310 TSNKVVLDVYLGK 348
S+ V VY G+
Sbjct: 66 PSSPHVKAVYQGE 78
>AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +1
Query: 130 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 309
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 310 TSNKVVLDVYLGK 348
S+ V VY G+
Sbjct: 66 PSSPHVKAVYQGE 78
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 118 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKN 243
+ +A LGLG +G +A L G V G+DP A AKN
Sbjct: 146 RTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKN 187
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 118 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAK 240
+NVA +G G MG +A GF V D +K AL+ A K
Sbjct: 12 RNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMK 52
>Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical
protein Y57G11C.11a protein.
Length = 268
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 139 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAA 234
+G+ GG ++ L + GF V G D +K A+ AA
Sbjct: 82 VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA 113
>U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical
protein T25D1.1 protein.
Length = 612
Score = 29.1 bits (62), Expect = 0.91
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 68 LSVCTQPPDGRIVLTPTRMWLSSAS-ETWED 157
+ VC PP TPTR+ L SAS + W+D
Sbjct: 544 ICVCNLPPRCLRTCTPTRLQLPSASNDVWDD 574
>Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical
protein F13H10.4c protein.
Length = 792
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 286 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 191
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 484 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 516
>Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical
protein F13H10.4b protein.
Length = 789
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 286 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 191
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 481 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 513
>Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical
protein F13H10.4a protein.
Length = 796
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 286 LHQRLQQW-SWLASLRSWPLRSVHLWKDRSREL 191
L+ RL++W W+ +S P R+ + W+ R+ +
Sbjct: 488 LYPRLEKWFHWIRITQSGPTRTTYRWRGRNETI 520
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 189 HSSRLRSFQRCTERSGQER 245
H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 189 HSSRLRSFQRCTERSGQER 245
H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159
>Z68161-10|CAN86582.1| 705|Caenorhabditis elegans Hypothetical
protein F20C5.1d protein.
Length = 705
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 86 PPDGRIVLTPTRMWLSSASETWEDSWLRT 172
PPDG + T+M + +E W+D LR+
Sbjct: 486 PPDGAVSFRLTKMDKDTFNEEWKDKKLRS 514
>Z68161-8|CAH60763.1| 625|Caenorhabditis elegans Hypothetical
protein F20C5.1c protein.
Length = 625
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 86 PPDGRIVLTPTRMWLSSASETWEDSWLRT 172
PPDG + T+M + +E W+D LR+
Sbjct: 330 PPDGAVSFRLTKMDKDTFNEEWKDKKLRS 358
>Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical
protein F20C5.1b protein.
Length = 764
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 86 PPDGRIVLTPTRMWLSSASETWEDSWLRT 172
PPDG + T+M + +E W+D LR+
Sbjct: 469 PPDGAVSFRLTKMDKDTFNEEWKDKKLRS 497
>Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical
protein F20C5.1a protein.
Length = 781
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 86 PPDGRIVLTPTRMWLSSASETWEDSWLRT 172
PPDG + T+M + +E W+D LR+
Sbjct: 486 PPDGAVSFRLTKMDKDTFNEEWKDKKLRS 514
>AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 short form protein.
Length = 764
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 86 PPDGRIVLTPTRMWLSSASETWEDSWLRT 172
PPDG + T+M + +E W+D LR+
Sbjct: 469 PPDGAVSFRLTKMDKDTFNEEWKDKKLRS 497
>AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 long form protein.
Length = 781
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 86 PPDGRIVLTPTRMWLSSASETWEDSWLRT 172
PPDG + T+M + +E W+D LR+
Sbjct: 486 PPDGAVSFRLTKMDKDTFNEEWKDKKLRS 514
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 189 HSSRLRSFQRCTERSGQER 245
H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 189 HSSRLRSFQRCTERSGQER 245
H SR +SF++ T+R+G+E+
Sbjct: 141 HGSRRKSFEKFTDRNGEEK 159
>Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical
protein F44F4.10 protein.
Length = 280
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 120 ECGFPRPRKHGRIHGCELG*KGFHSSRLRSFQRCTE 227
+CG+P RKH I+ L K F S +++ C+E
Sbjct: 238 DCGYPIVRKHFSINQLVLYYKTFGSIQMKQEDICSE 273
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 339 VHVEHDFIAGQYGNDHVDSINGCSNGVGWRHSVLGRCV 226
+H EH+ AG YG D + C++G G G C+
Sbjct: 670 IHCEHNCPAGSYG-DGCQQVCSCADGHGC-DPTTGECI 705
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 339 VHVEHDFIAGQYGNDHVDSINGCSNGVGWRHSVLGRCV 226
+H EH+ AG YG D + C++G G G C+
Sbjct: 670 IHCEHNCPAGSYG-DGCQQVCSCADGHGC-DPTTGECI 705
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 339 VHVEHDFIAGQYGNDHVDSINGCSNGVGWRHSVLGRCV 226
+H EH+ AG YG D + C++G G G C+
Sbjct: 670 IHCEHNCPAGSYG-DGCQQVCSCADGHGC-DPTTGECI 705
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 339 VHVEHDFIAGQYGNDHVDSINGCSNGVGWRHSVLGRCV 226
+H EH+ AG YG D + C++G G G C+
Sbjct: 670 IHCEHNCPAGSYG-DGCQQVCSCADGHGC-DPTTGECI 705
>Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical
protein C54E10.5 protein.
Length = 420
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 342 QVHVEHDFIAGQYGNDHVDSINGCSNGVGWRHSVLG 235
++HV + A ++GN H+D N +G ++V G
Sbjct: 263 KIHVHNHQFAARFGNYHIDYSNVSDHGFERFNNVFG 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.130 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,438,577
Number of Sequences: 27780
Number of extensions: 169338
Number of successful extensions: 474
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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