Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31243
         (546 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...    58   3e-09
U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...    54   7e-08
Z74043-6|CAA98543.1|  124|Caenorhabditis elegans Hypothetical pr...    28   3.8  
U82967-1|AAB40926.1|  124|Caenorhabditis elegans MAX-like-1 homo...    28   3.8  
AY559748-1|AAS72410.1|  671|Caenorhabditis elegans heat shock tr...    27   8.8  
AY559747-1|AAS72409.1|  671|Caenorhabditis elegans heat shock tr...    27   8.8  
AL033536-5|CAA22146.1|  671|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 42/118 (35%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
 Frame = +3

Query: 3   KHWITINEPREICYEGYGSVHKA----------PILNATAIGTYLCAKNVLIAHAKAYHL 152
           K WIT NE   I  + +GS+ K           P +       Y  A N+L+ HAK Y  
Sbjct: 162 KTWITYNE---INCQAWGSIVKVEGEFWLCPERPEIENHKQAPYFGAANMLLTHAKIYRN 218

Query: 153 YNNEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQAEFGLYAEPIFSEEGGFP 326
           Y+  +K  Q G  GIT       P TDS+ED  A    R   F    EPI S  G FP
Sbjct: 219 YDQNYKPTQHGILGITNGGRFCFPATDSQEDIEACNRARDWLFNFTIEPILSGSGDFP 276



 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 16/31 (51%), Positives = 27/31 (87%)
 Frame = +1

Query: 388 IPEFTDEERELVRGASDFFGVNHYTGFLVSA 480
           IP+F++EE+E+++G++DF G+N+Y  FLV A
Sbjct: 286 IPKFSEEEKEIIKGSTDFIGINYYLSFLVRA 316


>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score = 54.0 bits (124), Expect = 7e-08
 Identities = 28/80 (35%), Positives = 37/80 (46%)
 Frame = +3

Query: 102 YLCAKNVLIAHAKAYHLYNNEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQAEF 281
           Y+ A N+L+ HAK Y  Y   +K+ Q G  GIT       P +DS  D  A        F
Sbjct: 202 YIAATNMLLTHAKIYRNYQKNYKETQNGLIGITNGGRFCLPASDSPADLDACNRALDWLF 261

Query: 282 GLYAEPIFSEEGGFPKELVE 341
               EPI ++ G FP  + E
Sbjct: 262 NYTIEPILTDSGDFPASMRE 281



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 12/29 (41%), Positives = 25/29 (86%)
 Frame = +1

Query: 388 IPEFTDEERELVRGASDFFGVNHYTGFLV 474
           +P+F++EE++L++G++DF G+N+Y   +V
Sbjct: 286 LPKFSEEEKKLIKGSTDFLGINYYLSHIV 314


>Z74043-6|CAA98543.1|  124|Caenorhabditis elegans Hypothetical
           protein T19B10.11 protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 159 NEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQ 272
           ++ +D Q G CG    +  F P   + E H A E RR+
Sbjct: 5   SDLEDDQTGHCGSGEHSGPFDPKRHAREQHNALERRRR 42


>U82967-1|AAB40926.1|  124|Caenorhabditis elegans MAX-like-1 homolog
           protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 159 NEFKDKQGGQCGITISANSFRPFTDSEEDHAATELRRQ 272
           ++ +D Q G CG    +  F P   + E H A E RR+
Sbjct: 5   SDLEDDQTGHCGSGEHSGPFDPKRHAREQHNALERRRR 42


>AY559748-1|AAS72410.1|  671|Caenorhabditis elegans heat shock
           transcription factor 1 protein.
          Length = 671

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 385 RIPEFTDEERELVRGASDFFG--VNHYTGFLVSANEQISDRPYYTYTP*H 528
           R   + +  R++ +   D+ G  VN+Y+GF+ S    I  +P + Y   H
Sbjct: 467 RAAPYKNATRQMAQPQQDYSGGFVNNYSGFMPSDPSMIPYQPSHQYLQPH 516


>AY559747-1|AAS72409.1|  671|Caenorhabditis elegans heat shock
           transcription factor 1 protein.
          Length = 671

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 385 RIPEFTDEERELVRGASDFFG--VNHYTGFLVSANEQISDRPYYTYTP*H 528
           R   + +  R++ +   D+ G  VN+Y+GF+ S    I  +P + Y   H
Sbjct: 467 RAAPYKNATRQMAQPQQDYSGGFVNNYSGFMPSDPSMIPYQPSHQYLQPH 516


>AL033536-5|CAA22146.1|  671|Caenorhabditis elegans Hypothetical
           protein Y53C10A.12 protein.
          Length = 671

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 385 RIPEFTDEERELVRGASDFFG--VNHYTGFLVSANEQISDRPYYTYTP*H 528
           R   + +  R++ +   D+ G  VN+Y+GF+ S    I  +P + Y   H
Sbjct: 467 RAAPYKNATRQMAQPQQDYSGGFVNNYSGFMPSDPSMIPYQPSHQYLQPH 516


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,594,163
Number of Sequences: 27780
Number of extensions: 255455
Number of successful extensions: 731
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)