Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31240
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078533-1|AAC28380.1|  377|Homo sapiens evolutionarily related ...    31   3.2  

>AF078533-1|AAC28380.1|  377|Homo sapiens evolutionarily related
           interleukin-1beta converting enzyme protein.
          Length = 377

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 29/106 (27%), Positives = 45/106 (42%)
 Frame = +3

Query: 240 PSRSHNSLGKGIVEALLGAGHEVTWATPFPPKESTKGLKIIDVSATASVSEMIDMNDQRN 419
           P +   SLGK ++  LL    +         +E  K  KI D         ++D   Q+N
Sbjct: 10  PLKMLESLGKELISGLLD---DFVEKNVLKLEEEEKK-KIYDAKLQDKARVLVDSIRQKN 65

Query: 420 ADAGMALIRTFAANITXLSLSVPALQQAIVSGKYERGRHGVLLQRC 557
            +AG   ++TF  NI   S S+ A ++  V+G  E       L+ C
Sbjct: 66  QEAGQVFVQTF-LNIDKNSTSIKAPEET-VAGPDESVGSAATLKLC 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,858,284
Number of Sequences: 237096
Number of extensions: 2314924
Number of successful extensions: 12844
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 8755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12841
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)