Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31239
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 34 0.070
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 32 0.28
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 32 0.28
07_01_0344 - 2490700-2493249 32 0.37
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509... 31 0.49
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 30 1.1
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 29 2.0
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644... 29 2.0
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 29 3.5
02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354 29 3.5
02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459 28 4.6
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 28 4.6
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773... 28 6.1
10_01_0150 + 1747424-1747758,1748097-1748103 27 8.0
03_02_0902 + 12278770-12281448 27 8.0
02_03_0307 + 17546263-17546299,17546522-17548018,17548859-175489... 27 8.0
01_06_0851 + 32455364-32458050,32458883-32458922 27 8.0
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 34.3 bits (75), Expect = 0.070
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 141 EILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIAR 320
E++ + +PD + + + L E F + + +I+G TGES+T ++ + A
Sbjct: 8 EVVVFRSKLPDIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVESASRRAAA 67
Query: 321 SIMARGAA-GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYEL 464
+ G G+ +M ++RN + GA +P T +E+
Sbjct: 68 GLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEV 116
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 32.3 bits (70), Expect = 0.28
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +3
Query: 135 LNEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGE--SFTNEQILKRAV 308
L E + +PD D L L + F L R + +I+G+TGE SF + L R V
Sbjct: 4 LPEQFVFRSRLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRV 63
Query: 309 SIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELS 467
+ S + G+ +M+++ N + + GA+ +P T E++
Sbjct: 64 AAGLSSIG-VCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHTPPEIA 115
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 32.3 bits (70), Expect = 0.28
Identities = 29/141 (20%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Frame = +3
Query: 123 LDEVLNEILAA-KGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFT--NEQI 293
+DE E + + +PD L L E F + P+A +I +TG ++T ++
Sbjct: 17 VDEAPPEAVTVFRSKLPDIDIPSHLPLHEYCFARAAELPDAPCLIAAATGRTYTFAETRL 76
Query: 294 LKRAVSIARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYF 473
L R + A + G G+ +MV+++N +++ GA+ +P T E+
Sbjct: 77 LCRRAAAALHRLGVG-HGDRVMVLLQNCVEFAVAFFAASFLGAVTTAANPFCTPQEIHKQ 135
Query: 474 LQLLXPSIVFCDREYYNDIKK 536
+ ++ Y + +++
Sbjct: 136 FKASGVKLILTQSVYVDKLRQ 156
>07_01_0344 - 2490700-2493249
Length = 849
Score = 31.9 bits (69), Expect = 0.37
Identities = 28/112 (25%), Positives = 53/112 (47%)
Frame = +3
Query: 132 VLNEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVS 311
VL E+L A+ V+ A RD++ LAE A K++ T +I+ ++T E I K +
Sbjct: 707 VLFEVLCARPVINPALPRDQINLAEWALKWQKQKLLET-IIDPRLEGNYTLESIRKFSEI 765
Query: 312 IARSIMARGAAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELS 467
+ + G + +I V+ + ++ ++ LL S + P + + S
Sbjct: 766 AEKCLADEGRSRPSIGEVLWHLESALQLHQGLLQSANTDDLSQPELKLSDAS 817
>11_04_0439 +
17749634-17749858,17750164-17750301,17750770-17750943,
17751099-17751184,17751264-17751525,17751616-17751815,
17753631-17754086,17754198-17754474,17754694-17754828,
17754946-17755026,17756305-17756400,17756676-17756771,
17756844-17756900,17756975-17757043,17757158-17757237,
17758185-17758329,17758422-17758511,17758914-17758994,
17759103-17759198,17759279-17759335,17759417-17759461,
17759547-17759612,17760304-17760350,17762771-17762865,
17763375-17763393,17763438-17763498,17763637-17763660
Length = 1085
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 126 DEVLNEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNA-TNMINGSTGESFTNEQILKR 302
D++L +I+ + P + +L E A+HC++ + +A NG+T E F E L +
Sbjct: 571 DDILPKIVQCLTLEPKSDNNALYLLCEDAYHCMQSQGSAQEGERNGNTAEIF--EDWLSK 628
Query: 303 AVSIAR 320
+ +AR
Sbjct: 629 QMIVAR 634
>02_03_0300 + 17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 243 WRLVVSLDNGKQFLLISIYPALLHLERHLWPLIFHL 136
W + L Q L+ +YP L H+++++WP + L
Sbjct: 1320 WVPLQPLPESLQLHLLELYPLLEHIQKYIWPRLCKL 1355
>05_05_0034 - 21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -2
Query: 243 WRLVVSLDNGKQFLLISIYPALLHLERHLWPLIFHLTLHLDTVEKRLASLLKQCVTFYK- 67
W + L Q L+ +YP L ++++LWP + L ++ L L Q +TF K
Sbjct: 1426 WVPIQPLPESLQLHLLELYPVLETIQKYLWPRLCKLD------QQTLYELHYQMITFGKV 1479
Query: 66 -CLAIAASAFACQDR 25
C + AC R
Sbjct: 1480 FCTKSKPNCNACPMR 1494
>01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,
6448164-6448243,6449045-6449129,6449221-6449312,
6449388-6449456,6449544-6449580,6449662-6449744,
6450427-6450873,6450978-6451014,6451101-6451158,
6451243-6451382,6451610-6451675,6451794-6451908,
6453261-6453299,6453482-6453543
Length = 1927
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -2
Query: 243 WRLVVSLDNGKQFLLISIYPALLHLERHLWPLIFHLTLHLDTVEKRLASLLKQCVTFYK- 67
W + L Q L+ +YP L +++++LWP + L ++ L L Q +TF K
Sbjct: 1527 WVPLQPLPESLQLHLLEMYPMLENIQKYLWPRLCKLD------QRTLYELHYQMITFGKV 1580
Query: 66 -CLAIAASAFACQDR 25
C + AC R
Sbjct: 1581 FCTKSKPNCNACPMR 1595
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +3
Query: 12 QSTTLCPGRQTRLPRLPNTYKMSHTVLRGKPNASQLYLDEVLNEILAAKGVVPDAKERDR 191
QST PG++++ P + + HT A+QL ++E++ A+ + E+ +
Sbjct: 358 QSTASSPGKKSKSPVVKLMRGLLHTFSSDNEKANQL-----MSELVNAEKQKENVTEKQK 412
Query: 192 LILAEIAFHC 221
IL + HC
Sbjct: 413 EILKQELLHC 422
>02_05_1025 + 33588053-33589998,33590357-33590630,33591031-33591354
Length = 847
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/64 (21%), Positives = 33/64 (51%)
Frame = +3
Query: 24 LCPGRQTRLPRLPNTYKMSHTVLRGKPNASQLYLDEVLNEILAAKGVVPDAKERDRLILA 203
+CP + +LP + ++ + KP+ ++ YLD+ ++ I +G+ +R R +
Sbjct: 782 VCPSNSS--VKLPASSEVFACTVGKKPSMAKYYLDDTVDVIKMLQGLANAPSQRPRQVQL 839
Query: 204 EIAF 215
++F
Sbjct: 840 RVSF 843
>02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459
Length = 867
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 135 LNEILAAKGVVPDAKERDRLILAEIAFHCL----KKRPNATNMINGSTGES 275
L +IL + + P +E+D ++L +AF CL K RP + T S
Sbjct: 790 LKDILDQRIMAPTTEEKDIILLVLVAFACLQICPKSRPTMQQVCQAMTTRS 840
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 129 EVLNEILAAKGVVPDAKERDR 191
+VLNE LAA G VPD ++ +R
Sbjct: 28 DVLNEFLAAYGKVPDKEKEER 48
>08_02_1237 + 25475219-25475916,25476127-25476320,25476407-25477302,
25477416-25477490,25477582-25477689,25477780-25477897,
25478007-25478142,25478228-25478372,25478460-25479080,
25479166-25479597
Length = 1140
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 174 AKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMAR 335
+ ERD L + L KR A++ ++ T E + +L RAV S MAR
Sbjct: 891 SSERDWCSLTKTLLEILAKRSLASDELSQETLEMLSEIHLLNRAVKRKSSHMAR 944
>10_01_0150 + 1747424-1747758,1748097-1748103
Length = 113
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 3 LFYQSTTLCPGRQTRLPRLPNTYKMSHTVL 92
+F+ T CP R PRLP T + HT L
Sbjct: 11 VFFDKTAACPPPH-RWPRLPTTGTIGHTSL 39
>03_02_0902 + 12278770-12281448
Length = 892
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 132 VLNEILAAKGVVPDAKERDRLILAEIAFHCLKK 230
VL E+L A+ + ++ + LAE A HC KK
Sbjct: 730 VLFEVLCARPALNPTLAKEEVSLAEWALHCQKK 762
>02_03_0307 +
17546263-17546299,17546522-17548018,17548859-17548949,
17549054-17549621,17550591-17550670,17550993-17551077,
17551172-17551263,17551355-17551423,17551587-17551655,
17552217-17552510,17552761-17552797,17552883-17552972,
17553520-17553585,17553704-17553818,17553902-17553940,
17554519-17554700
Length = 1136
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 243 WRLVVSLDNGKQFLLISIYPALLHLERHLWP 151
W + L +F L+ +YP + ++++LWP
Sbjct: 800 WVKLQPLPFSAEFHLVGLYPIMRDVQKYLWP 830
>01_06_0851 + 32455364-32458050,32458883-32458922
Length = 908
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 132 VLNEILAAKGVVPDAKERDRLILAEIAFHCLKK 230
VL E+L A+ + ++ + LAE A HC KK
Sbjct: 734 VLFEVLCARPALNPTLAKEEVSLAEWALHCQKK 766
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,624,332
Number of Sequences: 37544
Number of extensions: 289478
Number of successful extensions: 751
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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