Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31237
(318 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 30 1.3
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 30 1.3
M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen p... 30 1.3
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 30 1.3
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein. 30 1.3
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 30 1.3
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 30 1.3
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 30 1.3
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein. 30 1.3
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 30 1.7
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 30 1.7
BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein pr... 30 1.7
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 30 1.7
AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein. 30 1.7
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein. 30 1.7
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 29 3.0
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ... 29 3.0
AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple ... 29 3.0
BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (P... 29 4.0
BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein. 29 4.0
BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein. 29 4.0
AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein. 29 4.0
AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein. 29 4.0
AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens ... 29 4.0
AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens ... 29 4.0
AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase prot... 29 4.0
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein. 29 4.0
AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domai... 29 4.0
AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein. 29 4.0
AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein. 29 4.0
AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein. 29 4.0
U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein. 28 5.2
K03179-1|AAA51847.1| 136|Homo sapiens COL1A1 protein. 28 5.2
CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein. 28 5.2
BX537373-1|CAD97615.1| 255|Homo sapiens hypothetical protein pr... 28 5.2
BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor... 28 5.2
AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens ... 28 5.2
AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein. 28 5.2
AB066564-1|BAB62266.1| 257|Homo sapiens HCCA2 protein. 28 5.2
AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein. 28 5.2
AB028173-1|BAB18568.1| 255|Homo sapiens HCCA2 protein. 28 5.2
AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein. 28 5.2
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 28 6.9
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 28 6.9
AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein. 28 6.9
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 28 6.9
AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein ... 28 6.9
AB065557-1|BAC45258.1| 542|Homo sapiens seven transmembrane hel... 28 6.9
U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein. 27 9.1
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 27 9.1
L38707-1|AAA98749.1| 942|Homo sapiens diacylglycerol kinase pro... 27 9.1
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 27 9.1
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 27 9.1
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 27 9.1
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 27 9.1
BC063801-1|AAH63801.1| 942|Homo sapiens diacylglycerol kinase, ... 27 9.1
BC048324-1|AAH48324.1| 483|Homo sapiens hemogen protein. 27 9.1
BC039204-1|AAH39204.1| 1051|Homo sapiens small G protein signali... 27 9.1
AY255672-1|AAP81221.1| 484|Homo sapiens negative differentiatio... 27 9.1
AY244805-1|AAP75762.1| 484|Homo sapiens hemogen protein. 27 9.1
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ... 27 9.1
AL499604-6|CAI12808.1| 484|Homo sapiens hemogen protein. 27 9.1
AL139410-4|CAI12720.1| 492|Homo sapiens RUN and SH3 domain cont... 27 9.1
AF322875-1|AAK26295.1| 484|Homo sapiens EDAG protein. 27 9.1
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 27 9.1
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 27 9.1
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein. 27 9.1
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein. 27 9.1
AB275762-1|BAF63512.1| 1051|Homo sapiens small G protein signali... 27 9.1
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein. 27 9.1
AB209503-1|BAD92740.1| 885|Homo sapiens diacylglycerol kinase, ... 27 9.1
AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant... 27 9.1
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 27 9.1
AB067471-1|BAB67777.1| 946|Homo sapiens KIAA1884 protein protein. 27 9.1
AB007857-1|BAA23693.3| 1016|Homo sapiens KIAA0397 protein protein. 27 9.1
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen
protein.
Length = 138
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 68 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 115
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 131 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 178
>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 130 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 273
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 552 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 599
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 558 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 605
>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 130 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 273
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 279 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 154
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 279 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 154
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 220 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGG 318
CR TP++SR +P G GPD+ +H A P G
Sbjct: 478 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSG 512
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 279 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 154
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein.
Length = 969
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 279 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 154
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
Length = 1135
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 220 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGG 318
CR TP++SR +P G GPD+ +H A P G
Sbjct: 956 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSG 990
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 262 PGLCGGPDVPAHGS 303
PG CG P PAHGS
Sbjct: 2861 PGFCGDPGTPAHGS 2874
>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
domains 1 protein protein.
Length = 3566
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 262 PGLCGGPDVPAHGS 303
PG CG P PAHGS
Sbjct: 2919 PGFCGDPGTPAHGS 2932
>AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple
domains 1 variant protein.
Length = 2966
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 262 PGLCGGPDVPAHGS 303
PG CG P PAHGS
Sbjct: 2334 PGFCGDPGTPAHGS 2347
>BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (POZ)
domain containing 5 protein.
Length = 621
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 316 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 185
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein.
Length = 1244
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 294 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 127
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1119 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1176
>BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.
Length = 1036
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Frame = +1
Query: 193 ALPAANAQLCRLRTPSV-------SRCAWAPGLC-GGPDVPAHGSAPPG 315
A P R RT SV S CA + +C G P P GS+PPG
Sbjct: 735 AAPTCTHMFLRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPG 783
>AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 316 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 185
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 316 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 185
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
FLJ16421 fis, clone BRACE3003920, weakly similar to
Serine/threonine-protein kinase K06H7.1 in chromosome III
(EC 2.7.1.-). ).
Length = 1167
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 294 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 127
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1050 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1107
>AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ32015 fis, clone NTONG1000052, weakly similar to
Rattus norvegicus mRNA for Kelch related protein 1. ).
Length = 472
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 316 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 185
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase protein.
Length = 1649
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 294 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 127
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1524 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1581
>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
Length = 3038
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQR-PGAQAQ 249
PP GA P AG S P +R PGA A+
Sbjct: 2318 PPPGAAPEAGPSAPSRRPPGADAE 2341
>AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domain
(PTPRF interacting) variant protein.
Length = 2202
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQR-PGAQAQ 249
PP GA P AG S P +R PGA A+
Sbjct: 2016 PPPGAAPEAGPSAPSRRPPGADAE 2039
>AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein.
Length = 645
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 294 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 127
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 520 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 577
>AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein.
Length = 1324
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 261 RPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 127
R AR++R P+P+ C RE S P R S HH
Sbjct: 540 RLSVARSSRIPRPSVSQGCSREASRESSRDTSPVRSFQPLASRHH 584
>AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.
Length = 1100
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Frame = +1
Query: 193 ALPAANAQLCRLRTPSV-------SRCAWAPGLC-GGPDVPAHGSAPPG 315
A P R RT SV S CA + +C G P P GS+PPG
Sbjct: 799 AAPTCTHMFLRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPG 847
>U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein.
Length = 866
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 274 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 149
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>K03179-1|AAA51847.1| 136|Homo sapiens COL1A1 protein.
Length = 136
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -2
Query: 317 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 171
PPG A G GPP PGA+ Q +G + A G R V G
Sbjct: 84 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKRGERGVPG 131
>CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein.
Length = 866
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 274 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 149
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>BX537373-1|CAD97615.1| 255|Homo sapiens hypothetical protein
protein.
Length = 255
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 314 PGGAEP*AGTSGPPQRPGAQAQRETL 237
PG EP G PP R GA +ET+
Sbjct: 21 PGSTEPREGEMSPPGRTGAHVCKETV 46
>BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor A
protein.
Length = 866
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 274 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 149
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ30442 fis, clone BRACE2009212. ).
Length = 599
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +3
Query: 177 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 308
DG L G L CF C G G ++W R+ T
Sbjct: 530 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 573
>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
Length = 1538
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 273 TEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSR 157
T R G AR++R P+P+ C R+ S P+R
Sbjct: 730 TSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
>AB066564-1|BAB62266.1| 257|Homo sapiens HCCA2 protein.
Length = 257
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 314 PGGAEP*AGTSGPPQRPGAQAQRETL 237
PG EP G PP R GA +ET+
Sbjct: 21 PGSTEPREGEMSPPGRTGAHVCKETV 46
>AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein.
Length = 514
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +3
Query: 177 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 308
DG L G L CF C G G ++W R+ T
Sbjct: 445 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 488
>AB028173-1|BAB18568.1| 255|Homo sapiens HCCA2 protein.
Length = 255
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 314 PGGAEP*AGTSGPPQRPGAQAQRETL 237
PG EP G PP R GA +ET+
Sbjct: 21 PGSTEPREGEMSPPGRTGAHVCKETV 46
>AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.
Length = 1289
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 273 TEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSR 157
T R G AR++R P+P+ C R+ S P+R
Sbjct: 481 TSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 519
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 264 RRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSP 133
RRP T TRRP+ T C RS T PV RR P
Sbjct: 173 RRPRTRTRTRRPR-TWPPRTCSSRSRTAARPPCTCSPVTPRRRP 215
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 293 AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQ 189
AG GPPQ+P +QR+ S + A A +A+
Sbjct: 33 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 67
>AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein.
Length = 703
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 184 RL*ALPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPG 315
R+ A PAA + +P V+RC+ P LC G HG + G
Sbjct: 267 RVHAAPAAPSATALPASP-VARCSSEPQLCPGSAPKTHGESDKG 309
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 293 AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQ 189
AG GPPQ+P +QR+ S + A A +A+
Sbjct: 9 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 43
>AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein
Nsp3 protein.
Length = 703
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 184 RL*ALPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPG 315
R+ A PAA + +P V+RC+ P LC G HG + G
Sbjct: 267 RVHAAPAAPSATALPASP-VARCSSEPQLCPGSAPKTHGESDKG 309
>AB065557-1|BAC45258.1| 542|Homo sapiens seven transmembrane helix
receptor protein.
Length = 542
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 311 GGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSA 192
G A A PP+RP A+A R ++GVR GSA
Sbjct: 211 GAAGCGAAGRAPPERPRARASRASVGVRGPSLRESPLGSA 250
>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 229 RTPSVSRCAWAPGLCGGPDVPAHGSAPPG 315
+TP RCA PGL GP + +PPG
Sbjct: 1306 QTPRGPRCACPPGL-SGPSCRSFPGSPPG 1333
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 210 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 247
>L38707-1|AAA98749.1| 942|Homo sapiens diacylglycerol kinase
protein.
Length = 942
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 214 QLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPGG 318
+LCRL S + AWA G G + G +P G
Sbjct: 346 ELCRLPPSSQACDAWAGGKAGSAVISEEGRSPGSG 380
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 210 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 247
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 210 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 247
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 210 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 247
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 210 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 247
>BC063801-1|AAH63801.1| 942|Homo sapiens diacylglycerol kinase,
theta 110kDa protein.
Length = 942
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 214 QLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPGG 318
+LCRL S + AWA G G + G +P G
Sbjct: 346 ELCRLPPSSQACDAWAGGKAGSAVISEEGRSPGSG 380
>BC048324-1|AAH48324.1| 483|Homo sapiens hemogen protein.
Length = 483
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 298 REQGHQDHHRGPAPRHSEKHS 236
++Q H HH+ P P E HS
Sbjct: 5 KDQSHLKHHQTPDPHQEENHS 25
>BC039204-1|AAH39204.1| 1051|Homo sapiens small G protein signaling
modulator 2 protein.
Length = 1051
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 281 GPPQRPGAQAQRETLGVRSRQS 216
GPP R + A+R LG+R R S
Sbjct: 209 GPPTRQDSPAKRPALGIRKRHS 230
>AY255672-1|AAP81221.1| 484|Homo sapiens negative differentiation
regulator protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 298 REQGHQDHHRGPAPRHSEKHS 236
++Q H HH+ P P E HS
Sbjct: 5 KDQSHLKHHQTPDPHQEENHS 25
>AY244805-1|AAP75762.1| 484|Homo sapiens hemogen protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 298 REQGHQDHHRGPAPRHSEKHS 236
++Q H HH+ P P E HS
Sbjct: 5 KDQSHLKHHQTPDPHQEENHS 25
>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
domains 2 protein.
Length = 3487
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 232 TPSVSRCAWAP-GLCGGPDVPAHG 300
T S+ C+ G+CG P +PAHG
Sbjct: 2821 TGSLPHCSGTSVGVCGDPGIPAHG 2844
>AL499604-6|CAI12808.1| 484|Homo sapiens hemogen protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 298 REQGHQDHHRGPAPRHSEKHS 236
++Q H HH+ P P E HS
Sbjct: 5 KDQSHLKHHQTPDPHQEENHS 25
>AL139410-4|CAI12720.1| 492|Homo sapiens RUN and SH3 domain
containing 1 protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 232 TPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P + R WAPG C G +P + P
Sbjct: 6 SPGLRRQDWAPGRCAGLHLPPRAPSSP 32
>AF322875-1|AAK26295.1| 484|Homo sapiens EDAG protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 298 REQGHQDHHRGPAPRHSEKHS 236
++Q H HH+ P P E HS
Sbjct: 5 KDQSHLKHHQTPDPHQEENHS 25
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 210 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 247
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 210 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 247
>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 229 RTPSVSRCAWAPGLCGGPDVPAHGSAPPG 315
+TP RCA PGL GP + +PPG
Sbjct: 1306 QTPRGPRCACPPGL-SGPSCRSFPGSPPG 1333
>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
Length = 2281
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 229 RTPSVSRCAWAPGLCGGPDVPAHGSAPPG 315
+TP RCA PGL GP + +PPG
Sbjct: 1266 QTPRGPRCACPPGL-SGPSCRSFPGSPPG 1293
>AB275762-1|BAF63512.1| 1051|Homo sapiens small G protein signaling
modulator 2 protein protein.
Length = 1051
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 281 GPPQRPGAQAQRETLGVRSRQS 216
GPP R + A+R LG+R R S
Sbjct: 209 GPPTRQDSPAKRPALGIRKRHS 230
>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
Length = 3631
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 232 TPSVSRCAWAP-GLCGGPDVPAHG 300
T S+ C+ G+CG P +PAHG
Sbjct: 2965 TGSLPHCSGTSVGVCGDPGIPAHG 2988
>AB209503-1|BAD92740.1| 885|Homo sapiens diacylglycerol kinase,
theta variant protein.
Length = 885
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 214 QLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPGG 318
+LCRL S + AWA G G + G +P G
Sbjct: 302 ELCRLPPSSQACDAWAGGKAGSAVISEEGRSPGSG 336
>AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant
protein.
Length = 1289
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 229 RTPSVSRCAWAPGLCGGPDVPAHGSAPPG 315
+TP RCA PGL GP + +PPG
Sbjct: 1257 QTPRGPRCACPPGL-SGPSCRSFPGSPPG 1284
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 196 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPP 312
+P Q+ L PSVS PG GP P G APP
Sbjct: 167 MPGMQQQMPTLPPPSVSATGPGPGPGPGPG-PGPGPAPP 204
>AB067471-1|BAB67777.1| 946|Homo sapiens KIAA1884 protein protein.
Length = 946
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 232 TPSVSRCAWAP-GLCGGPDVPAHG 300
T S+ C+ G+CG P +PAHG
Sbjct: 280 TGSLPHCSGTSVGVCGDPGIPAHG 303
>AB007857-1|BAA23693.3| 1016|Homo sapiens KIAA0397 protein protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 281 GPPQRPGAQAQRETLGVRSRQS 216
GPP R + A+R LG+R R S
Sbjct: 219 GPPTRQDSPAKRPALGIRKRHS 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,796,467
Number of Sequences: 237096
Number of extensions: 1167056
Number of successful extensions: 5949
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 4829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5937
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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