Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31234
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 104 6e-23
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 50 3e-06
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 50 3e-06
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 50 3e-06
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 50 3e-06
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 43 3e-04
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 36 0.025
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 36 0.025
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 31 0.94
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 30 2.2
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 29 2.9
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z22181-3|CAA80181.3| 416|Caenorhabditis elegans Hypothetical pr... 28 6.7
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 28 8.8
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 104 bits (250), Expect = 6e-23
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 9/224 (4%)
Frame = +3
Query: 147 NKKSVKMLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLD 326
N + + + VT +TL Q F +E++ ++T+ +K + EKG D+ + Q+LIY GKIL D
Sbjct: 46 NNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
Query: 327 DNKINSYNIDEKKFIVIMVTKPKVSESQPTSTSIPEAGESASTDSGDXXXXXXXXXXXXX 506
K+ D KF+V+M++K KV+E P+ST + A E +
Sbjct: 106 SVKVGEVGFDSSKFVVVMLSKRKVTEVAPSST-VATAAEPVPVAAAPASNPAPAADVAPE 164
Query: 507 XXXXXXXRVTETPNTTSDAELEATIQSIMDMGYDRPQVEQALRASFNNRERAVEYLITGI 686
E T E E + +I MGYDR Q ALRA+F N +RAVE+L+ G+
Sbjct: 165 AAAP-----AEAEALTD--EQEENVLAITGMGYDREQTIAALRAAFWNPDRAVEFLLNGL 217
Query: 687 P------XXXXXXXXXXXSSDE---DPLAFLRDQPQFQQMRAVI 791
P + DE D L L + PQ ++RA+I
Sbjct: 218 PDDAADQEPDLGPEQNIDNVDEDGNDDLNMLANMPQLAEIRALI 261
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 135 YNIQKESTLHLVL 147
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 211 YNIQKESTLHLVL 223
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 287 YNIQKESTLHLVL 299
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 363 YNIQKESTLHLVL 375
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 438
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 439 YNIQKESTLHLVL 451
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAG 311
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 135 YNIQKESTLHLVL 147
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 211 YNIQKESTLHLVL 223
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 287 YNIQKESTLHLVL 299
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 363 YNIQKESTLHLVL 375
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 514
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 515 YNIQKESTLHLVL 527
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 590
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 591 YNIQKESTLHLVL 603
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 666
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 667 YNIQKESTLHLVL 679
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 742
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 743 YNIQKESTLHLVL 755
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 818
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 819 YNIQKESTLHLVL 831
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 438
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 439 YNIQKESTLHLVL 451
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 134
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 135 YNIQKESTLHLVL 147
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 210
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 211 YNIQKESTLHLVL 223
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 286
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 287 YNIQKESTLHLVL 299
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 362
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 363 YNIQKESTLHLVL 375
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 438
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 439 YNIQKESTLHLVL 451
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 514
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 515 YNIQKESTLHLVL 527
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 590
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 591 YNIQKESTLHLVL 603
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 666
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 667 YNIQKESTLHLVL 679
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 742
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 743 YNIQKESTLHLVL 755
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 818
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 819 YNIQKQSTLHLVL 831
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
M + +KTL +T +E++ +T++ +K KI+ ++G D QRLI+AGK L D ++
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 345 YNIDEKKFIVIMV 383
YNI ++ + +++
Sbjct: 59 YNIQKESTLHLVL 71
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 165 MLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINS 344
ML+ +KTL + +++I+P + V+ +K K+E ++G QRLI+AGK + DD
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEG--IPPPQQRLIFAGKQMNDDKTAAD 58
Query: 345 YNI 353
Y +
Sbjct: 59 YKV 61
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +3
Query: 162 KMLVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKIN 341
K+ V++KTL +T I I +TV+ LK K++ + G D QRLI+ L +D +
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVP--PDQQRLIFGRAQLENDRALF 217
Query: 342 SYNIDEKKFI 371
+YNI ++ I
Sbjct: 218 AYNIRDEDII 227
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 168 LVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDN 332
+V +KTL + F +E+ E V ++K KIE +G A+ QRL YAG+ L D +
Sbjct: 1 MVFVKTLHRTLF-LEVAANEDVLSIKQKIEAAEG--IPAEEQRLCYAGRQLEDSD 52
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 168 LVTLKTLQQQTFQIEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDN 332
+V +KTL + F +E+ E V ++K KIE +G A+ QRL YAG+ L D +
Sbjct: 1 MVFVKTLHRTLF-LEVAANEDVLSIKQKIEAAEG--IPAEEQRLCYAGRQLEDSD 52
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 207 IEIDPEETVKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFIVIMVT 386
+E+ ++ +++K+ D V L Y G+ L D+ I SYNID+ + I +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFN-LYYGGQKLQDNRSIGSYNIDQSREIYLKKK 158
Query: 387 K 389
K
Sbjct: 159 K 159
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 216 DPEET-VKALKLKIEVEKGKDFVADHQRLIYAGKILLDDNKINSYNIDEK 362
DP E+ VK K++ E+ + K +A+ +LI+ + + K + YN+D+K
Sbjct: 213 DPGESMVKQQKMEDEIRRLKTLLAEKDQLIFDKDKQISNLKADQYNLDKK 262
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Frame = +3
Query: 201 FQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFI 371
+ +EI + +V LK K+ V K+ V +IY GKIL D+ + + I + +
Sbjct: 19 YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKILKDEETLTQHKIADGHTV 74
Query: 372 VIMVTK-----PKVSESQPTSTSIPEAGESAST 455
+++ P + + PT++S P + + S+
Sbjct: 75 HLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Frame = +3
Query: 201 FQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFI 371
+ +EI + +V LK K+ V K+ V +IY GKIL D+ + + I + +
Sbjct: 19 YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKILKDEETLTQHKIADGHTV 74
Query: 372 VIMVTK-----PKVSESQPTSTSIPEAGESAST 455
+++ P + + PT++S P + + S+
Sbjct: 75 HLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +3
Query: 201 FQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFI 371
+ +EI + +V LK K+ V K+ V +IY GKIL D+ + + I + +
Sbjct: 19 YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKILKDEETLTQHKIADGHTV 74
Query: 372 VIMVTK-----PKVSESQPTSTSIPEAGESAS 452
+++ P + + PT++S P G S
Sbjct: 75 HLVIRNQARPTPAPAAATPTASSAPTMGGMGS 106
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Frame = +3
Query: 201 FQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFI 371
+ +EI + +V LK K+ V K+ V +IY GKIL D+ + + I + +
Sbjct: 19 YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKILKDEETLTQHKIADGHTV 74
Query: 372 VIMVTK-----PKVSESQPTSTSIPEAGESAST 455
+++ P + + PT++S P + + S+
Sbjct: 75 HLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 345 YNIDEKKFIVIMVTKPKVSESQPTSTS 425
Y I E+ FI T+P SE QPT S
Sbjct: 530 YEIQEENFIAPKATEPSASEPQPTRAS 556
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Frame = +3
Query: 201 FQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFI 371
+ +EI + +V LK K+ V K+ V +IY GKIL D+ + + I + +
Sbjct: 19 YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKILKDEETLTQHKIADGHTV 74
Query: 372 VIMVTK-----PKVSESQPTSTSIPEAGESAST 455
+++ P + + PT++S P + + S+
Sbjct: 75 HLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +3
Query: 201 FQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFI 371
+ +EI + +V LK K+ V K+ V +IY GKIL D+ + + I + +
Sbjct: 19 YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKILKDEETLTQHKIADGHTV 74
Query: 372 VIMVTK-----PKVSESQPTSTSIPEAGESAS 452
+++ P + + PT++S P G S
Sbjct: 75 HLVIRNQARPTPAPAAATPTASSAPTMGGMGS 106
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Frame = +3
Query: 201 FQIEIDPEETVKALKLKIEV---EKGKDFVADHQRLIYAGKILLDDNKINSYNIDEKKFI 371
+ +EI + +V LK K+ V K+ V +IY GKIL D+ + + I + +
Sbjct: 19 YDVEIAADASVSELKDKVLVFVPTANKEQVC----IIYTGKILKDEETLTQHKIADGHTV 74
Query: 372 VIMVTK-----PKVSESQPTSTSIPEAGESAST 455
+++ P + + PT++S P + + S+
Sbjct: 75 HLVIRNQARPTPAPAAATPTASSAPSSNPTPSS 107
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 588 IMDMGYDRPQVEQALRASFNNRERAVEYL 674
++ MG+ +++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 588 IMDMGYDRPQVEQALRASFNNRERAVEYL 674
++ MG+ +++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 588 IMDMGYDRPQVEQALRASFNNRERAVEYL 674
++ MG+ +++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 588 IMDMGYDRPQVEQALRASFNNRERAVEYL 674
++ MG+ +++ ALR S N+ E+A++YL
Sbjct: 85 LITMGFKSEEIDTALRLSNNDVEKAIQYL 113
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 99 LTRQNYAVNPRAEFLQPGGSTSIERPPPRGAP 4
L +A+ PR + P G+ S+ R P G P
Sbjct: 89 LREGEFAIRPRQRMIPPAGANSLFRRPREGTP 120
>Z22181-3|CAA80181.3| 416|Caenorhabditis elegans Hypothetical
protein ZK632.4 protein.
Length = 416
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 379 WLQNLKSPRASLHQLPY 429
W+Q +K P S++QLPY
Sbjct: 326 WVQEVKGPAGSIYQLPY 342
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 171 VTLKTLQQQTFQIEIDPEETVKALKLKIEV-EKGKDFVADHQRLIYAGKILLDDNKINSY 347
VTLKTL + + I ++T+++L I++ + + + QR+I G++L + +
Sbjct: 23 VTLKTLDDREATVTIGLQDTIQSL---IDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 348 NIDEKKFIVIMVTKPKVSESQP 413
I + + + ++ P +P
Sbjct: 80 GISDGQTVHLVDRGPSGENDRP 101
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 171 VTLKTLQQQTFQIEIDPEETVKALKLKIEV-EKGKDFVADHQRLIYAGKILLDDNKINSY 347
VTLKTL + + I ++T+++L I++ + + + QR+I G++L + +
Sbjct: 23 VTLKTLDDREATVTIGLQDTIQSL---IDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 348 NIDEKKFIVIMVTKPKVSESQP 413
I + + + ++ P +P
Sbjct: 80 GISDGQTVHLVDRGPSGENDRP 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,887
Number of Sequences: 27780
Number of extensions: 300721
Number of successful extensions: 1032
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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