Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31228
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    27   0.60 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   3.2  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   3.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   5.6  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   7.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.4  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 0.60
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 141 ISNCLFQTRVLSQIGAFRH-HKHRSPSSSNPSLATKGSTSELTHRH 275
           ++NCL Q+   S  G F   H H SP   +P + +  + + LTH H
Sbjct: 456 MNNCL-QSGYFS--GGFSSLHSHHSPHHVSPGMGSTVNGASLTHSH 498


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 560 YPHVTQIVITILHKMSHFMSQV 495
           YP +  +V  I  K SHFMS +
Sbjct: 876 YPEIQSVVQCINGKFSHFMSSM 897


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 156  FQTRVLSQIGAFRHHKHR-SPSSSNPSLATKGSTSELTH 269
            F T+VLS  G FR + HR + +SS+   A K     + H
Sbjct: 945  FVTQVLSGHGCFRSYLHRFNRASSSRCPACKDEDETVDH 983


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 204 HRSPSSSNPSLATKGSTSELTHRHSPLSFSPDL 302
           H  PSS  P ++++ +T+ + H H  L + P +
Sbjct: 524 HLLPSSLYPPVSSESTTAPIFHTHF-LGYQPQM 555


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +3

Query: 210 SPSSSNPSLATKGSTSELTHRHSPLSFSPDLLSGS--RFRSGGRFCEA 347
           SP + N  +     +     R+ P+SF  D  SGS   F    R C A
Sbjct: 65  SPVNENIVIRLADGSRPWWERYQPISFKLDTRSGSEAEFADMSRRCNA 112


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 156 FQTRVLSQIGAFRHHKHRSPSSSNPSLATKGSTSELT 266
           + T+ LS  G FR + H+   +S+P      S  E T
Sbjct: 882 YMTQFLSDHGCFRSYLHKYRHASSPDCPACVSIVEST 918


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,434
Number of Sequences: 2352
Number of extensions: 14652
Number of successful extensions: 241
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)