Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31228
         (735 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    25   0.98 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.0  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.9  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    21   9.1  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    21   9.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.1  

>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 116 TSKKISNKYF*LSFPNACSITNRCF*APQAP 208
           T+ K   +Y   +FP+AC  TN     P  P
Sbjct: 5   TNPKGKKRYITAAFPSACGKTNLAMMKPTLP 35


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 268 WVNSLVEPFVASDGFDEDGDRCLWCLKAPICDRTR 164
           W+NS + PF+ +  +  D     W L    C ++R
Sbjct: 349 WINSAINPFIYA-FYSADFRLAFWRLTCRKCFKSR 382


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 341 AESTTGSETRPTEKIRRETQ 282
           A  TTG+ T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 560 YPHVTQIVITILHKMSH 510
           YPH TQI   ++  +SH
Sbjct: 139 YPHDTQICSMMIESLSH 155


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +3

Query: 105 KYLKRRKKYQISISNCLFQTRVLSQIGAFRHHKHRSPSSSNPSLATKGS---TSELTHRH 275
           +YL RR++ +I+ + CL +     QI  +  ++       N S  T GS    +E++ + 
Sbjct: 293 RYLTRRRRIEIAHALCLTE----RQIKIWFQNRRMKWKKENKSKGTPGSGDGDTEISPQT 348

Query: 276 SP 281
           SP
Sbjct: 349 SP 350


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +3

Query: 105 KYLKRRKKYQISISNCLFQTRV 170
           +YL RR++ +I+ + CL + ++
Sbjct: 31  RYLTRRRRIEIAHALCLTERQI 52


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +3

Query: 105 KYLKRRKKYQISISNCLFQTRV 170
           +YL RR++ +I+ + CL + ++
Sbjct: 31  RYLTRRRRIEIAHALCLTERQI 52


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 445 ISIGRKKNTNNLRLKCDTCD 504
           +S+ R+ +T     KCD C+
Sbjct: 135 LSVHRRIHTKERPYKCDVCE 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,781
Number of Sequences: 438
Number of extensions: 3535
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)