Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31222
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...   229   1e-60
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...   229   1e-60
U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa ...    41   8e-04
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    32   0.46 
M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U00065-2|AAL27237.1|  672|Caenorhabditis elegans Prion-like-(q/n...    29   3.3  
AC199158-8|ABO33283.1|  439|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC199158-4|ABO33286.1|  439|Caenorhabditis elegans Hypothetical ...    28   7.5  
U51995-2|AAA96071.1|  291|Caenorhabditis elegans F-box a protein...    27   9.9  

>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score =  229 bits (561), Expect = 1e-60
 Identities = 112/192 (58%), Positives = 135/192 (70%), Gaps = 4/192 (2%)
 Frame = +2

Query: 83  KVYVVGVGMTNFVKPST--GGDYPDFGKEAVLEALADARIKYDDIQQAVCGYVFGDSTCG 256
           KVY+VGVGMT F KP +  G DYPD  KEAV  AL D ++KY DIQQA  GY+FG + CG
Sbjct: 7   KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66

Query: 257 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVALAVGFEKMAPGALG--G 430
           QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G  DV L  GFE+MAPG+L    
Sbjct: 67  QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMAPGSLENLA 126

Query: 431 GHFDDRTNPMDRHTLKMAEIADLTGAPITAQYFGNAAIEHMKKYGTTELHLAKIAAKNHR 610
              DDR   +D+H   M+E   L  AP+TAQ FGNAA EHM+KYG+   H AKIA KNH 
Sbjct: 127 APIDDRALSVDKHISVMSETYGLEPAPMTAQMFGNAAKEHMEKYGSKREHYAKIAYKNHL 186

Query: 611 HGVKNPRAQGKK 646
           H V NP++Q  K
Sbjct: 187 HSVHNPKSQFTK 198


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score =  229 bits (561), Expect = 1e-60
 Identities = 112/192 (58%), Positives = 135/192 (70%), Gaps = 4/192 (2%)
 Frame = +2

Query: 83  KVYVVGVGMTNFVKPST--GGDYPDFGKEAVLEALADARIKYDDIQQAVCGYVFGDSTCG 256
           KVY+VGVGMT F KP +  G DYPD  KEAV  AL D ++KY DIQQA  GY+FG + CG
Sbjct: 7   KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66

Query: 257 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVALAVGFEKMAPGALG--G 430
           QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G  DV L  GFE+MAPG+L    
Sbjct: 67  QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESGNSDVVLCAGFERMAPGSLENLA 126

Query: 431 GHFDDRTNPMDRHTLKMAEIADLTGAPITAQYFGNAAIEHMKKYGTTELHLAKIAAKNHR 610
              DDR   +D+H   M+E   L  AP+TAQ FGNAA EHM+KYG+   H AKIA KNH 
Sbjct: 127 APIDDRALSVDKHISVMSETYGLEPAPMTAQMFGNAAKEHMEKYGSKREHYAKIAYKNHL 186

Query: 611 HGVKNPRAQGKK 646
           H V NP++Q  K
Sbjct: 187 HSVHNPKSQFTK 198


>U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa
           thiolase protein 1 protein.
          Length = 407

 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
 Frame = +2

Query: 50  GIVIIIITMPRKVYVVGVGMT---NFVKPSTGGDYPDFGKEAVLEALADARIKYDDIQQA 220
           GI        +  ++VG   T   +F    +    P+    A+  AL    +K   IQ+ 
Sbjct: 12  GITTSAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEV 71

Query: 221 VCGYVFGDSTCGQRVLYQVGM-----TGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVA 385
             G V   +  GQ    Q  +       + +  VN  CS+G  A+ L+ Q I+ G  D A
Sbjct: 72  FLGQVC-QANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFA 130

Query: 386 LAVGFEKMA 412
           +  G E M+
Sbjct: 131 IGGGMESMS 139


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
           protein F32H2.5 protein.
          Length = 2586

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 245 STCGQRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGMCDVALAVG 397
           S    R+ Y   + G P ++V+  CS+   AL L+   I  G CD A+  G
Sbjct: 147 SMFSNRISYTFDLQG-PSFSVDTACSSSLLALQLAVDSIRQGQCDAAIVAG 196


>M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical
           protein B0303.3 protein.
          Length = 448

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
 Frame = +2

Query: 149 DFGKEAVLEALADARIKYDDIQQAVCGYVFGD---STCGQRVLYQVGMTG-IPIYNVNNN 316
           D  KEA+   +   ++ Y+ +   +CG V  +   S   +      G+   IP + V   
Sbjct: 50  DLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLA 109

Query: 317 CSTGSNALFLSKQLIEGGMCDVALAVGFEKMA 412
           C + + A+     ++  G  +  +A G E ++
Sbjct: 110 CISSNVAMTTGMGMLATGNANAIIAGGVELLS 141


>U00065-2|AAL27237.1|  672|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 25
           protein.
          Length = 672

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 302 NVNNNCSTGSNALFLSKQLIEGGMCDVALAVGFE-KMAPGALG 427
           NVN  C  GSN    S Q++    C   +++GF+ + A   LG
Sbjct: 491 NVNGYCQGGSNGQCNSNQVLINNQCYNTVSIGFQCQFAQQCLG 533


>AC199158-8|ABO33283.1|  439|Caenorhabditis elegans Hypothetical
           protein AC8.10 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 461 PLGWFCHRNDHLPKHREPFSRILRQVLH 378
           PLG+F H     P H+E F+ +LR  L+
Sbjct: 309 PLGFFIHTTKERPNHKE-FAELLRSELN 335


>AC199158-4|ABO33286.1|  439|Caenorhabditis elegans Hypothetical
           protein AC8.3 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 461 PLGWFCHRNDHLPKHREPFSRILRQVLH 378
           PLG+F H     P H+E F+ +LR  L+
Sbjct: 309 PLGFFIHTTKERPNHKE-FAELLRSELN 335


>U51995-2|AAA96071.1|  291|Caenorhabditis elegans F-box a protein
           protein 52 protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -3

Query: 508 SSC*ISNFCHFKCVPVHWVGSVIEMTTSQSTGSHFLES-YGKCYIT 374
           SS  I +  HF+C  +H+VG V   T  Q        S +  C IT
Sbjct: 192 SSTIIVHLFHFQCFSIHYVGKVSVQTAIQMREDLLRRSTFQSCEIT 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,759,790
Number of Sequences: 27780
Number of extensions: 372467
Number of successful extensions: 975
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)