Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31220
(615 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 31 0.13
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 31 0.17
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.23
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 29 0.40
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 29 0.53
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 28 1.2
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.2
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 1.6
SPBC1604.10 |srb7|med21|mediator complex subunit Srb7 |Schizosac... 27 1.6
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 1.6
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 27 1.6
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 2.2
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 27 2.8
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 2.8
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 2.8
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 2.8
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 26 3.8
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 26 3.8
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 26 3.8
SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces pombe... 26 3.8
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 26 5.0
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 26 5.0
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 25 6.6
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 6.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 6.6
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 6.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 8.7
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 25 8.7
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.7
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 31.1 bits (67), Expect = 0.13
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 234 EQISVKAHSLEQENQQMKLEFEILRLENESLKLEVAKYESASQKRR 371
E +VK HSLE E +K ++ ++ E K E+ YES ++++
Sbjct: 705 ESDTVKLHSLESEISLLKDKYTVVSRSVEDKKKEIGHYESLIKEKQ 750
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 30.7 bits (66), Expect = 0.17
Identities = 13/42 (30%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Frame = +3
Query: 156 GDFLSEAGSLFGSEGGLCSVDDLND---NEQISVKAHSLEQE 272
GDF EAG+L ++ G+C++D+ + ++Q+++ ++EQ+
Sbjct: 520 GDFTIEAGALMLADNGICAIDEFDKMDLSDQVAIH-EAMEQQ 560
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 30.3 bits (65), Expect = 0.23
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 234 EQISVKAHSLEQENQQMKLEFEILRLENESLKLEVAKYESASQ 362
E+ + L +E QQ+KLE E L E E E +YE +
Sbjct: 142 EEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKE 184
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 29.5 bits (63), Expect = 0.40
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 220 SSTEQSPPSLPNKLPASDRKS 158
+S SPPS+P K+P+S+ KS
Sbjct: 293 ASATSSPPSVPQKIPSSNHKS 313
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 29.1 bits (62), Expect = 0.53
Identities = 34/142 (23%), Positives = 53/142 (37%)
Frame = +3
Query: 96 LDGTPNRVNAPSSSQPTSCNGDFLSEAGSLFGSEGGLCSVDDLNDNEQISVKAHSLEQEN 275
L GT N P + DFL A E + + + E+ +E+ N
Sbjct: 117 LSGTCIITNIPEEEDSSDLENDFLYGADEFSSDEEEMDDISVTSSEEEEEENGARIEELN 176
Query: 276 QQMKLEFEILRLENESLKLEVAKYESASQKRRGDGHDSGDFNVFSETSIDGEGRVTGLLG 455
E + + E E L+ V K E A +K D + +T++D V G
Sbjct: 177 SD---EEDAEQAEEEILEKPVPKDEVA-EKHSKDKLKKEEKE--KKTAVDVSDSVNGKKR 230
Query: 456 SLEVPFVLSEETKAREERMKTY 521
E P E+T+ + + KTY
Sbjct: 231 KTE-PAGEGEQTEKKSKSTKTY 251
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 246 VKAHSLEQENQQMKLEFEILRLENESLKLEVAKYESASQKR 368
++AH E+E QQ++L + + L +E + E+AK E QK+
Sbjct: 47 IRAHFQEEEFQQIRLMHKRMLLRDEKID-ELAKLEHLWQKQ 86
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.9 bits (59), Expect = 1.2
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +3
Query: 63 QLALEGAQKEKLDGTPNRVNAPSSSQPTSCNGDFLSEAGSLFGSEGGLCSVDDLNDN-EQ 239
QL+ A+KE T N ++ +S T CN A S+ + + L+ + ++
Sbjct: 554 QLSTLAAEKEAAVATNNELSESKNSLQTLCNAFQEKLAKSVMQLKENEQNFSSLDTSFKK 613
Query: 240 ISVKAHSLEQENQQMKLEFEILRLENESLKLEVAKYESASQKRRGDGHD 386
++ LE +Q + + + + + L+LE A +E + +D
Sbjct: 614 LNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENND 662
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 6 SDSKYKCEIAKLKNRNQELQLALEGAQKEKLDGTPNRVNAPSSSQPTSCNGD---FLSEA 176
+D EI KLK +NQ L LE +K+K++ ++ S P + D F S A
Sbjct: 166 ADVSKDAEIKKLKLQNQLLISQLEEIRKDKMNELTSQTTDQLSVTPKKADNDSYYFESYA 225
Query: 177 GS 182
G+
Sbjct: 226 GN 227
>SPBC1604.10 |srb7|med21|mediator complex subunit Srb7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 138
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 KAHSLEQENQQMKLEFEILRLENESLKLEVAK 344
K L+ ++ +LE + L ENE LKL++AK
Sbjct: 92 KIKKLQNSIEEKQLERKSLESENEDLKLQLAK 123
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 127 HLVVNRQAVMVTSCRKRGVCLA 192
HL+ N + V+ +SCRK+ + LA
Sbjct: 50 HLLTNTKVVLKSSCRKQAIILA 71
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 27.5 bits (58), Expect = 1.6
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 30 IAKLKNRNQELQLALEGAQKEKLDGTPNRVNAPSSSQPTSCNGDFLSEAGSLFGSEGGLC 209
IA+ + Q+L ALEGAQ E+++ N SSS + +FL SL GL
Sbjct: 198 IARQQEAAQKLVEALEGAQ-EEIENKSVSGNTNSSSVSGNHAAEFLEYVESLKKKASGLE 256
Query: 210 SVDDLNDNEQ 239
+ ++ +E+
Sbjct: 257 IMSLIDSSEE 266
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +3
Query: 393 DFNVFSETSIDGEGRVTGLLGSLEVPFVLSEETKAREERMKTYFRSKLSQIQVEKAELKS 572
++N + S D EG+ G+LG + +++ +A + ++ + R+ L + + E AE S
Sbjct: 143 NWNANCKPSHDPEGKTLGILGLGGIGKTMAKRARAFDMKIVYHNRTPLPEEEAEGAEFVS 202
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 26.6 bits (56), Expect = 2.8
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -3
Query: 466 TSRLPKSPVTLPSPS-IDVS--LNTLKSPESCPSPLLFCEADSYFATSNFKLSFSKRKIS 296
TS PKS + PSPS I S L+ ++SP P+ + AD TSNF + IS
Sbjct: 461 TSGRPKS-MAPPSPSPISPSFPLHEIQSP--MPNRRMAASADDISQTSNFTTEIKGKCIS 517
Query: 295 N 293
N
Sbjct: 518 N 518
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.6 bits (56), Expect = 2.8
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Frame = +3
Query: 99 DGTPNRVNAPSSSQPTSCNGDFLS--------EAGSLFGSEGGLCSVDDLNDNEQIS--- 245
DG N V++ ++ + + NGD S F E SV D+ ++E+
Sbjct: 1142 DGIKNVVDSINNLRTSIANGDIKEPLDVVTDDNTNSNFSLEETNASVTDMPESEKHENGI 1201
Query: 246 VKAHSLEQENQQMKLEFEILRLENESLKLEVAKYE 350
+A+ L++ + +FE+L+ + L +++A YE
Sbjct: 1202 FQAYLLKEMPNDIVSQFEMLKSKQIELTVQMASYE 1236
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/41 (24%), Positives = 26/41 (63%)
Frame = +3
Query: 222 LNDNEQISVKAHSLEQENQQMKLEFEILRLENESLKLEVAK 344
L DN+ SL++EN++++ + ++ EN S++ ++++
Sbjct: 642 LEDNDSTISSLESLKRENEELREQLKVEHEENISMQKQLSE 682
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +3
Query: 237 QISVKAHSLEQENQQMKLEFEILRLENESLKLEVAKYESASQKRRGDGHDSGDFNVFSET 416
++ + L+ +N+ K ++E ++ EN+ L E + S +K + HD + + F +
Sbjct: 175 ELFTQKQMLQLQNENFKDDYEKIKEENKRLYKERKSFLSKIEKSACEIHDLKESDSFKDH 234
Query: 417 SI 422
I
Sbjct: 235 EI 236
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 217 STEQSPPSLPNKLPASDRKSPL 152
ST PPSLP + +S + SP+
Sbjct: 127 STNSKPPSLPPRTKSSSQSSPM 148
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 3.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 271 SCSKECALTLICSLSFKSSTEQSPPSLPNKLPASDRKSPLQLVG*LLDGALTLF 110
S ++ + SLS KS+ L K S +KS +Q+V L+DG LF
Sbjct: 153 SIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILF 206
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 51 NQELQLALEGAQKEKLDGTPNRVNAPSSSQ 140
N E + + K +GTP+R N+P SQ
Sbjct: 308 NHEREFSTINMNKSSSNGTPDRANSPIPSQ 337
>SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 3.8
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 189 GSEGGL--CSVDDLNDNEQ-ISVKAHSLEQENQQMKLEFEILRLENESLKLEVAKYESAS 359
G +G + C V ND+ + ISV EQ N + +L+ IL LEN S L + + S
Sbjct: 136 GKKGAVAGCGVFFGNDDPRNISVPLAGEEQTNNRAELQAIILALENTSGDLTIRSDSNYS 195
Query: 360 QK 365
K
Sbjct: 196 IK 197
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 492 KAREERMKTYFRSKLSQIQVEKAELKSKTEHYIKECELLRL 614
KA +R K F + I++ + + YIK+C+L L
Sbjct: 176 KANIQRQKLDFNNLKKAIELRNQKFLQGIKEYIKKCQLTEL 216
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 258 SLEQENQQMKLEFEILRLENESLKLEVAKYESASQKRRGD 377
+L+Q+ ++ E+E +R+E E+L+ + ESA ++ D
Sbjct: 804 TLQQKCLNLQYEYENVRIELENLQSRALELESALEQSVSD 843
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 286 FICWFSCSKECALTLICSLSF-KSSTEQSPPSLPNKL 179
FI W C+ C L+C + + S+E LP+ L
Sbjct: 205 FIYWDRCTNACLRLLLCYIRYTNKSSETGFSCLPSAL 241
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 6.6
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = +3
Query: 378 GHDSGDFNVFSETS--IDGEGRVTGLLGSLEVPFVLSEETKAREERMKTYFRSKLSQIQV 551
GH+ + + E E VTGL P S RE+ K Y K +
Sbjct: 12 GHEFCSYRIKGEAQNFCRNEYNVTGLCNRQSCPLANSRYATVREDNGKLYLYMK----TI 67
Query: 552 EKAELKSKTEHYIK 593
E+A SK IK
Sbjct: 68 ERAHFPSKLWQRIK 81
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +3
Query: 222 LNDNEQISVKAHSLEQENQQMKLEFEILRLENESLKLEVAKYES 353
++ NE++ + + ++ + E ++ +N SL++ ++KYES
Sbjct: 78 VSQNERLMKLVNKQREIIYELHKDLEKVKKDNTSLRMRLSKYES 121
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 9 DSKYKCEIAKLKNRNQELQLALEGAQKE 92
+S Y+ E+AK K + E QLALE A KE
Sbjct: 104 ESLYE-EVAKAKAKAVEDQLALEEADKE 130
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 27 EIAKLKNRNQELQLALEGAQKEKLDGTP 110
EIA LK R E L + + +KL TP
Sbjct: 997 EIASLKKRIHEKSLVVNALEDKKLAATP 1024
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 171 EAGSLFGSEGGLCSVDDLN 227
E+G+L S+GG+C +D+ +
Sbjct: 594 ESGALVLSDGGICCIDEFD 612
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 232 LSFKSSTEQSPPSLPNKLPASDRKSPLQL 146
LS++S + PP + L SD+ PLQL
Sbjct: 611 LSWRSHSHPIPPVQVSPLFTSDKNDPLQL 639
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,394,040
Number of Sequences: 5004
Number of extensions: 51074
Number of successful extensions: 225
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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