Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31210
(343 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 25 0.19
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.58
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 1.8
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 2.4
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 2.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 3.1
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 4.1
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 4.1
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 5.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 5.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 5.4
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 20 7.2
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 20 7.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 7.2
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 20 7.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 20 7.2
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 25.4 bits (53), Expect = 0.19
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 208 HHRSFSTPCIFQKSILPNEISTGTTFL 128
H+R+ +T +F+K+ L + S+GTT L
Sbjct: 712 HNRNVTTCNMFRKTNLSGDSSSGTTLL 738
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 0.58
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -1
Query: 175 QKSILPNEISTGTTFLRI*YKTNAQSQNYDNEITNYAQSEWKQR*NSKLHFTRQWLNG 2
Q + +E S+ + + YK++ S N D + T Y + ++ K WL G
Sbjct: 945 QNDYIVDESSSSSFYSSFLYKSSESSCNPDQKPTEYLLEDSMKQQYGKRRKEPPWLEG 1002
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 1.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 172 SGKYKVSKKIGGGSFGDI 225
+G + IGGG FGD+
Sbjct: 630 AGYITIEAIIGGGEFGDV 647
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 2.4
Identities = 4/12 (33%), Positives = 8/12 (66%)
Frame = +3
Query: 174 WKIQGVEKDRWW 209
W + +++ RWW
Sbjct: 35 WVVNNIKRKRWW 46
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 2.4
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 297 GVSGLCRFNFHCHLLASSDVDSQIYITERSTTDLFR 190
G+ C F+ ++ DV S +Y+ E ++ R
Sbjct: 116 GLHVSCSFSAGSTIIREGDVGSIVYVMEEGKVEVSR 151
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 3.1
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 161 SERDLHGNDIFTYLIQNKCTK 99
S + +H N+ + Y N C K
Sbjct: 86 SNKTIHNNNNYKYNYNNNCKK 106
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 4.1
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1
Query: 79 FHYHNFDFVHLFCIKYVKMSF 141
++Y+N ++ L+C Y K+ +
Sbjct: 89 YNYNNNNYKKLYCNNYKKLYY 109
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 4.1
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1
Query: 79 FHYHNFDFVHLFCIKYVKMSF 141
++Y+N ++ L+C Y K+ +
Sbjct: 89 YNYNNNNYKKLYCNNYKKLYY 109
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +1
Query: 79 FHYHNFDFVHLFCIKYVKMSF 141
++Y+N ++ L+C Y K+ +
Sbjct: 89 YNYNNNNYKKLYCNNYRKLYY 109
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +1
Query: 94 FDFVHLFCIKYVKMSFPWRS 153
F+ + +KY+ +PW S
Sbjct: 509 FNIIKFVPVKYLTYEYPWWS 528
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +1
Query: 94 FDFVHLFCIKYVKMSFPWRS 153
F+ + +KY+ +PW S
Sbjct: 562 FNIIKFVPVKYLTYEYPWWS 581
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 20.2 bits (40), Expect = 7.2
Identities = 13/56 (23%), Positives = 24/56 (42%)
Frame = -2
Query: 237 DSQIYITERSTTDLFRHLVFSRNQYFRTRSPRERHFYVFDTKQMHKVKIMIMKSQI 70
+SQ+ + STT + R Y + R H Y D ++ + +M+ +I
Sbjct: 74 NSQVQPSVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKLMNEENGVMEIKI 129
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 20.2 bits (40), Expect = 7.2
Identities = 13/56 (23%), Positives = 24/56 (42%)
Frame = -2
Query: 237 DSQIYITERSTTDLFRHLVFSRNQYFRTRSPRERHFYVFDTKQMHKVKIMIMKSQI 70
+SQ+ + STT + R Y + R H Y D ++ + +M+ +I
Sbjct: 74 NSQVQPSVASTTGFSKECYCCRESYLKERHITLHHCYDADGIKLMNEENGVMEIKI 129
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 7.2
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3
Query: 230 KYISPNDPPPIFFDTLYFPEINTSERDLHGNDIFTYL 120
K +SP P + PEI D+ +DI T L
Sbjct: 272 KKLSPATPKGSKCSMITTPEIKKEVEDMEYDDIKTEL 308
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 269 KLNLQRPDTPNFSMRAEC 322
K R DT NFS +EC
Sbjct: 54 KYRALRLDTGNFSWGSEC 71
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 200 SVVDRSVIYIWLSTSE 247
+V+DR+VI W+ T +
Sbjct: 271 TVLDRNVIDKWIKTED 286
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,216
Number of Sequences: 438
Number of extensions: 3015
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7839909
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -