Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31206
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 168 6e-43
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 43 5e-05
SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces... 32 0.068
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 32 0.090
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 29 0.48
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 29 0.48
SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 29 0.64
SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|ch... 28 1.1
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 27 2.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 2.6
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 26 4.5
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 26 4.5
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 26 5.9
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 7.8
SPAP8A3.06 |||U2AF small subunit, U2AF-23|Schizosaccharomyces po... 25 7.8
SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr... 25 7.8
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 168 bits (409), Expect = 6e-43
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 3/216 (1%)
Frame = +2
Query: 53 RLPERYGAGEKSVWVEYIQLAAEYK-PAVNLGQGFPDYHAPKHVTEALSQIATSENPLLH 229
R + A VW Q AE K P V+L QGF +Y+ PK V +A + + + +
Sbjct: 7 RPSNKVAASRPDVWTLVNQATAECKVPPVSLSQGFFNYNPPKFVLDAAKK--SIDEVACN 64
Query: 230 QYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIII 409
QY+ G P L + LS+ YSP R ++ EI+VT+GA E +S ++ GDEVI++
Sbjct: 65 QYSHTRGRPSLRKALSEAYSPYFKRTLNPDTEIVVTAGANEGFFSVFAAFLNPGDEVIVM 124
Query: 410 EPYFDCYDFMVKCAGGVPRFIALKPKPQGD--DISSADWVLDEAELASLFNNRTKMIIVN 583
EP+FD Y + GGVP ++ + P +G +S+ W LD +L + +TKMI++N
Sbjct: 125 EPFFDQYISNITMNGGVPVYVPIIPPEEGSVKPVSAGAWKLDMNKLRNAITEKTKMIVIN 184
Query: 584 TPHNPLGKVFTQRELELIADLCKKHNVLCLSDEVYE 691
TPHNPLGK+F++ EL IADL KHN+L +SDEVY+
Sbjct: 185 TPHNPLGKIFSEEELNEIADLVLKHNLLVVSDEVYD 220
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 42.7 bits (96), Expect = 5e-05
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 3/169 (1%)
Frame = +2
Query: 194 SQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEA--LYST 367
S++ E+ L Y+ G+P + +++ G + ++I +TSGA A L T
Sbjct: 123 SKMLLKESGSLGAYSASQGIPLVRRHVADFIRARDGFDCEP-SDIYLTSGASHAARLIMT 181
Query: 368 ILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFIALKPKPQGD-DISSADWVLDEAELA 544
++ T D V++ P + Y + G +L + D D DEA
Sbjct: 182 LIIARPT-DGVMVPAPQYPLYGAQIDLMSGSMVSYSLSEENNWDIDFDQFKKSFDEASKK 240
Query: 545 SLFNNRTKMIIVNTPHNPLGKVFTQRELELIADLCKKHNVLCLSDEVYE 691
+ ++ +V P NP G ++ +E + K ++ L+DEVY+
Sbjct: 241 GI---NVRLCVVINPGNPTGACISENSMEKVLRFAKAKGIVLLADEVYQ 286
>SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 32.3 bits (70), Expect = 0.068
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +2
Query: 530 EAELASLFNNRTKMIIVNTPHNPLGKVFTQRELELIADLCKKHNVLCLSDEVY 688
EA+LASL NR K+I + ++ G V E I DL KK+ + DEV+
Sbjct: 296 EAKLASLPLNRPKIIAFESVYSMSGNVAPISE---ICDLAKKYGAITFLDEVH 345
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 31.9 bits (69), Expect = 0.090
Identities = 38/153 (24%), Positives = 65/153 (42%)
Frame = +2
Query: 230 QYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIII 409
QY + G+P LV+ + + Q + +I +T+G L + V+ GD I+I
Sbjct: 96 QYGQCQGIPELVKFIKDHVGQIHMPQYKDW-DIKITNGNTIGLEYCLRLLVNRGD-CILI 153
Query: 410 EPYFDCYDFMVKCAGGVPRFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTP 589
E Y GV +FI + G S + V++ + +SL + + T
Sbjct: 154 EKYTYPAAITAMRPLGV-KFIPIDMDENGMLPESFEKVMETWD-SSLGARPHVLYTIPTG 211
Query: 590 HNPLGKVFTQRELELIADLCKKHNVLCLSDEVY 688
NP G T + L KK++++ + DE Y
Sbjct: 212 QNPTGSTLTLERRKKFLTLAKKYDIIIVEDEPY 244
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 29.5 bits (63), Expect = 0.48
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 317 FNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFDCYDFMVKCAGGVPRFI-ALKPKP 490
F ++ S A Y +L H D + +I+I+P + F + GGVP + A+ KP
Sbjct: 583 FLQVFNNSPDETAFYRHMLNHEDVNNSLIMIQPTLQSFSF--EHPGGVPVLLDAVSVKP 639
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 29.5 bits (63), Expect = 0.48
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 161 YHAPKHVTEALSQIATSENP-LLHQYTRGFGLPRLVENLSKVYSPLIGRQ 307
Y P +T+ L I +SEN L+HQ R GLP+ +E +Y+P RQ
Sbjct: 604 YWDPFMITD-LKFIGSSENAELIHQRLRN-GLPKSIEKGPFIYNPFNRRQ 651
>SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 29.1 bits (62), Expect = 0.64
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 578 VNTPHNPLGKVFTQRELELIADLCKKHNVLCLSDEVY 688
+ T NP G + + I L +KH+++ L DE Y
Sbjct: 212 IPTGQNPTGSTLSVERRKQIYTLAQKHDIIILEDEPY 248
>SPAC17C9.14 |||Pex19 protein family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 232
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 485 KPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRE 625
KP DD+ D +LD+ ++ S F N K I H G + E
Sbjct: 21 KPNFDDLDDLDDILDDLDVPSAFKNEEKKNI--DEHKQTGNTSKENE 65
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 626 LELIADLCKKHNVLCLSDEV 685
LE LCK HNVL ++DEV
Sbjct: 229 LEEAYKLCKAHNVLFIADEV 248
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 221 LLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTS 340
LL RG G R E+L K PL+ ++AFN +L+++
Sbjct: 720 LLRALFRGIGGGRF-ESLYKEVMPLLHALLEAFNSLLISA 758
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 500 DISSADWVLDEAELASLFNNRTKMIIVNTPH 592
DI +++W+ +SL NRT +++ + H
Sbjct: 771 DIHTSNWIYKHCFQSSLMENRTVILVTHNVH 801
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +2
Query: 260 LVENLSKVYSPL--IGRQIDAFNEILVTSGAYEALYSTILGHVDTG--DEVIIIEPYFDC 427
++E + K S L + ++ID + L A++ LYS +L V G D + ++E +C
Sbjct: 536 VIEIVQKSLSVLHKVTKKIDKKAQHLQQLNAFQLLYSLVLLQVYAGDTDSIDVLEDIDNC 595
Query: 428 Y 430
Y
Sbjct: 596 Y 596
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 257 RLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDE 397
R++ N++K + I +D FNE+ + L + GHVD DE
Sbjct: 74 RVLRNVNKKFEGDIKNCLDGFNELNDPIVQEKILRAFEQGHVDEEDE 120
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 7.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 194 SQIATSENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEIL 331
S + T N L T FG L + V + L+ R+I+ F E+L
Sbjct: 460 STLNTFMNELNSSMTSAFGDTFLASTVQNVMNCLLYRKIENFEEVL 505
>SPAP8A3.06 |||U2AF small subunit, U2AF-23|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 581 NTPHNPLGKVFTQREL 628
N H P GK FTQREL
Sbjct: 54 NPIHEPNGKKFTQREL 69
>SPAC18G6.11c |rrn3||ribosomal DNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 599
Score = 25.4 bits (53), Expect = 7.8
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 455 GVPRFIALKP-KPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELE 631
GV + L P +P +S A ++ A T IIVN + Q E E
Sbjct: 380 GVLTEVCLDPSQPYTLRLSGAMYIGSYVARAKALEKNTIQIIVNMMTRWVEAYLDQCENE 439
Query: 632 LIADLCKKHNV 664
L DL KH+V
Sbjct: 440 LSDDLLSKHSV 450
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,985,748
Number of Sequences: 5004
Number of extensions: 61962
Number of successful extensions: 191
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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