Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31205
(634 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 183 2e-47
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 143 2e-35
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 110 1e-25
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 107 2e-24
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 106 3e-24
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 97 1e-21
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 52 9e-08
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 29 0.74
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 27 1.7
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 26 3.9
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 26 3.9
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 26 3.9
SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr ... 25 9.1
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 183 bits (446), Expect = 2e-47
Identities = 83/193 (43%), Positives = 116/193 (60%)
Frame = +2
Query: 2 CAGSRTFVEDKIYDQFVELSAERANRRVVGDPFRPDVEQGPQIDNEQRDKILQLISXXXX 181
CAGSR +V++ +YD+F++ +A VGDPF D QG Q+ +Q ++I+ I
Sbjct: 305 CAGSRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQVSKQQYERIVSYIESGIA 364
Query: 182 XXXXXXXXXXXXXXXXYFVQPTVFCDVTDDMDIAKTEIFGPVQQILKFSQFDEVVERANN 361
YFV+PT+ +VT+DM + K EIFGPV ++KF +E + R NN
Sbjct: 365 HGAKLEIGGKRHGNLGYFVEPTILSNVTEDMAVGKEEIFGPVLAVIKFKTIEEAIRRGNN 424
Query: 362 SEYGLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGL 541
S YGLAA V T ++ A L AGT+WVN YN+ +Q+PFGG+K+SG+GRE G YGL
Sbjct: 425 STYGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKESGIGRELGSYGL 484
Query: 542 RNYLEVKAVVVKL 580
NY + KAV + L
Sbjct: 485 TNYTQTKAVHINL 497
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 143 bits (346), Expect = 2e-35
Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Frame = +2
Query: 5 AGSRTFVEDKIYDQFVELSAERANRR-VVGDPFRPDVEQGPQIDNEQRDKILQLISXXXX 181
+ SR +V+D +YD+F+EL + + +VG PF + GP ++ Q ++I I
Sbjct: 299 SNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKK 358
Query: 182 XXXXXXXXXXXXXXXX-YFVQPTVFCDVTDDMDIAKTEIFGPVQQILKFSQFDEVVERAN 358
YF+ PT+F D +++M I K EIFGPV I KF DE +E+AN
Sbjct: 359 EGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKAN 418
Query: 359 NSEYGLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYG 538
N+ YGLAA FTKDL++A+ L AG +++N Q PFGG K SG+G E G G
Sbjct: 419 NTTYGLAAMCFTKDLERAHRVSDELEAGMVFINSTENSDIQAPFGGIKMSGIGNELGSNG 478
Query: 539 LRNYLEVKAVVVKLADK 589
+ Y ++KAV + +K
Sbjct: 479 IEMYTQIKAVHINFNNK 495
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 110 bits (265), Expect = 1e-25
Identities = 63/190 (33%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Frame = +2
Query: 11 SRTFVEDKIYDQFVELSAERANRRVVGDPFRPDVEQGPQIDNEQRDKILQLISXXXXXXX 190
+R +V +YD+FV E+ VGD F GP I + K+ + I
Sbjct: 302 NRVYVHKNVYDEFVSKLTEKVKTIKVGDGFDSSSAVGPLISQDGCKKVSKHIEDAVSKGA 361
Query: 191 XXXXXXXXXXXXX-YFVQPTVFCDVTDDMDIAKTEIFGPVQQILKFSQFDEVVERANNSE 367
YF +PTV VT DM +A E FGP+ + KF +EV+E AN+S+
Sbjct: 362 KITVGGKEISSSKGYFFEPTVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIEWANDSD 421
Query: 368 YGLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRN 547
GLA VFT +L + + L G + N V + FGG KQSG G+E G G++
Sbjct: 422 VGLAGYVFTNNLSTMIHVAKELEVGLVGANIEMVDEPFISFGGIKQSGFGKEAGRLGVQE 481
Query: 548 YLEVKAVVVK 577
++ VK + +K
Sbjct: 482 FMVVKEINLK 491
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 107 bits (256), Expect = 2e-24
Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
Frame = +2
Query: 5 AGSRTFVEDKIYDQFVELSAERANRRVVGDPFRPDVEQGPQIDNEQRDKILQLI-SXXXX 181
A SR V + + D+ + AN+ ++G+ P V GP + Q +KI+ I S
Sbjct: 307 AASRLIVHESVADEVLGGLVSEANKLIIGNGLDPQVTLGPVVSKTQFEKIVSYIQSAINE 366
Query: 182 XXXXXXXXXXXXXXXXYFVQPTVFCDVTDDMDIAKTEIFGPVQQILKFSQFDEVVERANN 361
YF+ PTVF +V I + EIFGPV + F +E +E AN+
Sbjct: 367 GCKCVVGGLPRSEQKGYFIPPTVFTNVQTHNKIWREEIFGPVLAVKTFHTNEEALELAND 426
Query: 362 SEYGLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGL 541
SEYGL + VF+ + +F + AG +N+Y+V +++P+ G+K SGLG +G
Sbjct: 427 SEYGLGSGVFSTNPKTLEFFSNNIEAGMCSLNNYHVVTHELPWIGWKHSGLGVGLSKHGY 486
Query: 542 RNYLEVKAV 568
Y+ +K +
Sbjct: 487 NEYMRLKQI 495
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 106 bits (254), Expect = 3e-24
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 CAGSRTFVEDKIYDQFVELSAERANRRVVGDPFRPDVEQGPQIDNEQRDKILQLISXXXX 181
CA +R +V +YD FV+L ER ++ +G V GP I + K+ Q +
Sbjct: 305 CA-NRIYVHSSVYDAFVDLVTERVSKFKLGYGLDAGVTHGPLISEKAISKVKQHVEDAVQ 363
Query: 182 XXXXXXXXXXXXXXXX-YFVQPTVFCDVTDDMDIAKTEIFGPVQQILKFSQFDEVVERAN 358
+ +PTV + M I++ E FGPV + KF DEVV AN
Sbjct: 364 KGGVVVTGGKVASNLGPMYFEPTVIINAKQGMLISEEETFGPVGALFKFDTEDEVVAWAN 423
Query: 359 NSEYGLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYG 538
+S GLA +F+KD+ + + L+ G + N V PFGG K+SG GRE YG
Sbjct: 424 DSPVGLAGYLFSKDISRVFRVGEALQVGMVGCNTGLVSDVLSPFGGVKESGFGREGSKYG 483
Query: 539 LRNYLEVKAVVV 574
+ YL++K++ +
Sbjct: 484 ISEYLDIKSLTI 495
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 97.5 bits (232), Expect = 1e-21
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Frame = +2
Query: 2 CAG-SRTFVEDKIYDQFVELSAERANRRVVGDPFRPDVEQGPQIDNEQRDKILQLISXXX 178
C G R D +YD + R + +G + DV+ G + N + D + LI
Sbjct: 273 CIGIERIIALDGVYDTIITKLYNRISTMRLGMYTQNDVDMGAMVSNNRFDHLESLIQDAV 332
Query: 179 XXXXXXXXXXXXXXXXXY----FVQPTVFCDVTDDMDIAKTEIFGPVQQILKFSQFDEVV 346
Y + PT+ D T++M IA+ E F P+ + + + +
Sbjct: 333 SKGARLVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQEECFAPIALVFRAKSPEHAL 392
Query: 347 ERANNSEYGLAAAVFTKDLDKANYFVQRLRAGTIWVNDYNVFG-NQVPFGGFKQSGLGRE 523
E AN +E+GL A+VF +D YF L G + VND+ F Q+PFGG K+SG GR
Sbjct: 393 EIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFYLLQMPFGGCKKSGYGRF 452
Query: 524 NGPYGLRNYLEVKAV 568
G GLR KA+
Sbjct: 453 AGYEGLRGICNSKAI 467
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 51.6 bits (118), Expect = 9e-08
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Frame = +2
Query: 230 YFVQPTVFCDVTDDMDIAKTEIFGPVQQILKF--SQFDEVVERAN-NSEYGLAAAVFTKD 400
+FV+PTV DI E+FGPV + + D V + + + YGL ++F +D
Sbjct: 412 FFVEPTVLLSKNPKHDIFVNELFGPVLSVYVYEDDNLDAVCDLIDTTTPYGLTGSIFAQD 471
Query: 401 LDKANYFVQRLR--AGTIWVNDY---NVFGNQVPFGGFKQSGLGRENG 529
RLR AG ++ND V G Q PFGG + SG + G
Sbjct: 472 RVVVRKLTDRLRNAAGNFYINDKCTGAVVGEQ-PFGGARASGTNDKAG 518
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 28.7 bits (61), Expect = 0.74
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -2
Query: 441 PARSLCTK*LALSRSLVKTAAASPYSELLARSTTSSNWENFRICCTGPKISVLAMSMSSV 262
P S+ + SLV TA+ASP S + S++S + E G IS + + S++
Sbjct: 468 PTVSMSIAATSFGSSLVLTASASPSSTSVDGSSSSDSSEASGAASVGVSISAIVLCASTL 527
Query: 261 TS 256
S
Sbjct: 528 IS 529
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 449 WVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNYLEVKAVVVKLADKN 592
W+ D + FGG+K S L R+ G L N L ++ +A+KN
Sbjct: 269 WLRDAETAVVEEWFGGYKVSKLMRQLGAGSLLNDLSMRMENFVVAEKN 316
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 331 LGELQDLLHRPKDLCLSDVHVVGDVTEDGGLH 236
LGE L +RPKD + + T+ GG H
Sbjct: 866 LGEASSLFYRPKDKIMEADKARANFTQPGGDH 897
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1
Query: 466 VVVVNPNGAGAQPLYEVVGLV 404
VVV NG G+QPL V GLV
Sbjct: 195 VVVDCANGVGSQPLKTVAGLV 215
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 26.2 bits (55), Expect = 3.9
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -2
Query: 459 SLTQMVPARSLCTK*LALSRSLVKTAAASPYSELLARSTTSSNWENFRICCTGPKISVLA 280
S +Q P RS K + S + S ++ S T+ E +CCT P++ +A
Sbjct: 397 STSQQQPERSSAVKTTPMKCSSLSNIYTSDLFFAISSSNTN---EGDVVCCTAPEVGRIA 453
Query: 279 MSMSSVTSQKTV 244
+ S T +
Sbjct: 454 NAWQSGTQPSLI 465
>SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 341 VVERANNSEYGLAAAVFTKDLDKANYFVQRLRAGT 445
+++ S+Y + AV K +D YFV+ A T
Sbjct: 87 LLDPIQQSQYAIPMAVLAKSIDLPTYFVELRHAIT 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,816,595
Number of Sequences: 5004
Number of extensions: 30549
Number of successful extensions: 104
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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